RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 MAPK10P53779 464 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 CDKN2DP55273 166 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 RPA4Q13156 261 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 CBLBQ13191 982 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 CUL1Q13616 776 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 KCNAB1Q14722 419 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 TGIF1Q15583 401 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 AARS2Q5JTZ9 985 aaKnown RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 TEDDM1Q5T9Z0 273 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 MRNIPQ6NTE8 343 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 IRGCQ6NXR0 463 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 TRIM73Q86UV7 250 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 ADGRF3Q8IZF5 1079 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 SIDT2Q8NBJ9 832 aaKnown RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 C2CD4AQ8NCU7 369 aaPredicted RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 MNS1Q8NEH6 495 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 FLVCR1-AS1Q8TAF5 88 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 USP7Q93009 1102 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 ART4Q93070 314 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 SH3KBP1Q96B97 665 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 CERS2Q96G23 380 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 MAP3K3Q99759 626 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 TWSG1Q9GZX9 223 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 KLHL25Q9H0H3 589 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 L2HGDHQ9H9P8 463 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 ZDHHC18Q9NUE0 388 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 SIDT1Q9NXL6 827 aaKnown RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 WHRNQ9P202 907 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 ZC3H7BQ9UGR2 993 aaKnown RBP10.9□□□□□ -0.66
RAB5B-208ENST00000550283 PCDHGA8Q9Y5G5 932 aa10.9□□□□□ -0.66
RAB5B-208ENST00000550283 GCN1Q92616 2671 aaKnown RBP10.89□□□□□ -0.67
RAB5B-208ENST00000550283 OR5K3A6NET4 321 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 EFCAB7A8K855 629 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 HCRTR1O43613 425 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 CTSBP07858 339 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 PVRP15151 417 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 PAMP19021 973 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 ECHS1P30084 290 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 SSTR1P30872 391 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 SLC5A2P31639 672 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 GMPRP36959 345 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 EIF2S3P41091 472 aaKnown RBP10.89□□□□□ -0.67
RAB5B-208ENST00000550283 CD151P48509 253 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 PLTPP55058 493 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 ARL4CP56559 192 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 GPX6P59796 221 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 YBX1P67809 324 aaKnown RBP10.89□□□□□ -0.67
RAB5B-208ENST00000550283 THOC5Q13769 683 aaKnown RBP10.89□□□□□ -0.67
RAB5B-208ENST00000550283 PLCL1Q15111 1095 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 WHAMMP3Q1A5X7 153 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 SYTL3Q4VX76 610 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 DNAJC21Q5F1R6 531 aaKnown RBP10.89□□□□□ -0.67
RAB5B-208ENST00000550283 SPANXN3Q5MJ09 141 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 C19orf48Q6RUI8 117 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 MTERF4Q7Z6M4 381 aaKnown RBP10.89□□□□□ -0.67
RAB5B-208ENST00000550283 SDCCAG8Q86SQ7 713 aaPredicted RBP10.89□□□□□ -0.67
RAB5B-208ENST00000550283 CLEC14AQ86T13 490 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 ZFAND4Q86XD8 727 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 CNTN4Q8IWV2 1026 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 PDIK1LQ8N165 341 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 MMGT1Q8N4V1 131 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 C2orf73Q8N5S3 287 aaPredicted RBP10.89□□□□□ -0.67
RAB5B-208ENST00000550283 LINC01555Q8NAE3 123 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 CFAP61Q8NHU2 1237 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 CD200R1Q8TD46 325 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 DCBLD2Q96PD2 775 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 TCF12Q99081 682 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 AARSD1Q9BTE6 412 aaKnown RBP10.89□□□□□ -0.67
RAB5B-208ENST00000550283 STN1Q9H668 368 aaKnown RBP10.89□□□□□ -0.67
RAB5B-208ENST00000550283 SAYSD1Q9NPB0 183 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 HRASLS2Q9NWW9 162 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 GNPTGQ9UJJ9 305 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 IKZF3Q9UKT9 509 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 ASF1AQ9Y294 204 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 B3GALT1Q9Y5Z6 326 aa10.89□□□□□ -0.67
RAB5B-208ENST00000550283 TEX51A0A1B0GUA7 166 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 KLHL33A6NCF5 533 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 NRP2O60462 931 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 TIAF1O95411 115 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 ESR1P03372 595 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 FOLR1P15328 257 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 WT1P19544 449 aaPredicted RBP10.88□□□□□ -0.67
RAB5B-208ENST00000550283 ADARP55265 1226 aaKnown RBP10.88□□□□□ -0.67
RAB5B-208ENST00000550283 EFTUD2Q15029 972 aaKnown RBP eCLIP10.88□□□□□ -0.67
RAB5B-208ENST00000550283 ZIC1Q15915 447 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 CLPPQ16740 277 aaPredicted RBP10.88□□□□□ -0.67
RAB5B-208ENST00000550283 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.88□□□□□ -0.67
RAB5B-208ENST00000550283 ARMC3Q5W041 872 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 ANKS6Q68DC2 871 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 IGF2-ASQ6U949 168 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 CYHR1Q6ZMK1 362 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 MAATS1Q7Z4T9 603 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 LRRC6Q86X45 466 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 FAM129CQ86XR2 697 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 RASGRP3Q8IV61 690 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 RBM12BQ8IXT5 1001 aaKnown RBP10.88□□□□□ -0.67
RAB5B-208ENST00000550283 ZBED8Q8IZ13 594 aa10.88□□□□□ -0.67
RAB5B-208ENST00000550283 SNIP1Q8TAD8 396 aaKnown RBP10.88□□□□□ -0.67
RAB5B-208ENST00000550283 DENND1AQ8TEH3 1009 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms