RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 MYLK4Q86YV6 388 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 C7orf61Q8IZ16 206 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 TMEM102Q8N9M5 508 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 OR8D1Q8WZ84 308 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 CDKL2Q92772 493 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ARRDC3Q96B67 414 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 PLA2G2FQ9BZM2 168 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 LRMDAQ9H2I8 198 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 MTO1Q9Y2Z2 717 aaKnown RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 NCKAP5O14513 1909 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 A0A1W2PPV9 198 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 NPIPB13A6NJU9 1138 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 NPIPB4C9JG80 1138 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 TO15178 435 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 CCNT2O60583 730 aaKnown RBP4.78□□□□□ -1.65
SCAF11-212ENST00000549162 KRT37O76014 449 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 SERPINE1P05121 402 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 IGHV4-34P06331 123 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 TPBGLP0DKB5 382 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 ATP5F1P24539 256 aaPredicted RBP4.78□□□□□ -1.65
SCAF11-212ENST00000549162 BNIP1Q12981 228 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 MMRN1Q13201 1228 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 EIF3IQ13347 325 aaKnown RBP4.78□□□□□ -1.65
SCAF11-212ENST00000549162 NFATC4Q14934 902 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 ATAT1Q5SQI0 421 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 MRGPREQ86SM8 312 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 ADAMTSL2Q86TH1 951 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 LONP2Q86WA8 852 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 TICAM1Q8IUC6 712 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 HID1Q8IV36 788 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 OR8H2Q8N162 312 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 MINDY1Q8N5J2 469 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 OR8J2Q8NGG1 315 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 OR8K3Q8NH51 312 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 WFDC5Q8TCV5 224 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 ITPKCQ96DU7 683 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 VPS50Q96JG6 964 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 LCORQ96JN0 433 aaPredicted RBP4.78□□□□□ -1.65
SCAF11-212ENST00000549162 NSUN5Q96P11 429 aaKnown RBP4.78□□□□□ -1.65
SCAF11-212ENST00000549162 PCDHAC1Q9H158 963 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 SPATS2LQ9NUQ6 558 aaKnown RBP4.78□□□□□ -1.65
SCAF11-212ENST00000549162 SYBUQ9NX95 663 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 NDE1Q9NXR1 346 aa4.78□□□□□ -1.65
SCAF11-212ENST00000549162 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.78□□□□□ -1.65
SCAF11-212ENST00000549162 SLC12A8A0AV02 714 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CFAP73A6NFT4 308 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 M0R3H8 397 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 C8BP07358 591 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CA3P07451 260 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 SERPINA6P08185 405 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ALOX5P09917 674 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 RHOXF2BP0C7M4 288 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 GIMD1P0DJR0 217 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ADRB3P13945 408 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 HSD17B1P14061 328 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 TYRP14679 529 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CAPN3P20807 821 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 PSMB4P28070 264 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 PTPN6P29350 595 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 HPDP32754 393 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 RPL3P39023 403 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 MAGEA2P43356 314 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 SUZ12Q15022 739 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 DENND2CQ68D51 928 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 H3F3CQ6NXT2 135 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ZCCHC8Q6NZY4 707 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 PNCKQ6P2M8 343 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 PRMT9Q6P2P2 845 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 GCNT7Q6ZNI0 430 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 Q6ZSR3 168 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CLRN3Q8NCR9 226 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 GPR156Q8NFN8 814 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CCDC138Q96M89 665 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 AGAP3Q96P47 875 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 SNX18Q96RF0 628 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 PAFAH2Q99487 392 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 MED10Q9BTT4 135 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 MAK16Q9BXY0 300 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 SYNDIG1Q9H7V2 258 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 DUS2Q9NX74 493 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 THUMPD1Q9NXG2 353 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 RSPH14Q9UHP6 348 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 TRAF6Q9Y4K3 522 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 LY6G6EA0A0G2JKS1 128 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 SRP72O76094 671 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 JCHAINP01591 159 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 LTA4HP09960 611 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 EFNA1P20827 205 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 LHCGRP22888 699 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 WDR4P57081 412 aaKnown RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 GABREP78334 506 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 SLC10A7Q0GE19 358 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 PDE1CQ14123 709 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF789Q5FWF6 425 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 GLRA4Q5JXX5 417 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 ARMC12Q5T9G4 340 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 AAGABQ6PD74 315 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 CAMK1DQ8IU85 385 aa4.77□□□□□ -1.65
SCAF11-212ENST00000549162 PYROXD2Q8N2H3 581 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms