RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ART3Q13508 389 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TDGQ13569 410 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 SKIV2LQ15477 1246 aaKnown RBP13.14□□□□□ -0.31
PTCH1-215ENST00000547672 PHKG1Q16816 387 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 C10orf62Q5T681 223 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TBC1D3GQ6DHY5 549 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TBC1D3CQ6IPX1 549 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 CYB5D1Q6P9G0 228 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 LPCAT2Q7L5N7 544 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 LRRTM4Q86VH4 590 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 HORMAD1Q86X24 394 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 RASGRP3Q8IV61 690 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 KLHDC8AQ8IYD2 350 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TBC1D3Q8IZP1 549 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-215ENST00000547672 MIER2Q8N344 545 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 RAB42Q8N4Z0 105 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 KYQ8NBH2 561 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 PCYOX1LQ8NBM8 494 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 CFAP61Q8NHU2 1237 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 HLA-CQ95604 372 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 PPP1R36Q96LQ0 422 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 NSUN5Q96P11 429 aaKnown RBP13.14□□□□□ -0.31
PTCH1-215ENST00000547672 LENG8Q96PV6 779 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-215ENST00000547672 ZNF385DQ9H6B1 395 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 WDR26Q9H7D7 661 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 AKTIPQ9H8T0 292 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 POLMQ9NP87 494 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-215ENST00000547672 ITM2CQ9NQX7 267 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 HEBP1Q9NRV9 189 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 DNAJC11Q9NVH1 559 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 ATXN10Q9UBB4 475 aa13.14□□□□□ -0.31
PTCH1-215ENST00000547672 TICRRQ7Z2Z1 1910 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 LRRC14BA6NHZ5 514 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 BBIP1A8MTZ0 92 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 PLK4O00444 970 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 IFRD1O00458 451 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-215ENST00000547672 CLGNO14967 610 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 PIP5K1BO14986 540 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 CHUKO15111 745 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 KDM1AO60341 852 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 RNGTTO60942 597 aaKnown RBP13.13□□□□□ -0.31
PTCH1-215ENST00000547672 OR4F21O95013 312 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 SNRPB2P08579 225 aaKnown RBP13.13□□□□□ -0.31
PTCH1-215ENST00000547672 CCND1P24385 295 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 NUDT1P36639 197 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 CTSCP53634 463 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 CDK3Q00526 305 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 FASTKQ14296 549 aaKnown RBP13.13□□□□□ -0.31
PTCH1-215ENST00000547672 WSCD2Q2TBF2 565 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 GGTA1PQ4G0N0 100 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 KHDC1Q4VXA5 237 aaKnown RBP13.13□□□□□ -0.31
PTCH1-215ENST00000547672 ATP6AP1LQ52LC2 224 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 SLC44A4Q53GD3 710 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 HABP4Q5JVS0 413 aaKnown RBP13.13□□□□□ -0.31
PTCH1-215ENST00000547672 LIPJQ5W064 366 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 ZNF852Q6ZMS4 543 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 RINLQ6ZS11 566 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 RPS27LQ71UM5 84 aaKnown RBP13.13□□□□□ -0.31
PTCH1-215ENST00000547672 HEATR4Q86WZ0 1026 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 GALNT13Q8IUC8 556 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 KIF2BQ8N4N8 673 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 CDYL2Q8N8U2 506 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 SNX31Q8N9S9 440 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 DENND6BQ8NEG7 585 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 CCDC97Q96F63 343 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-215ENST00000547672 CATSPER2Q96P56 530 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 ACTR8Q9H981 624 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 SGK2Q9HBY8 427 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 GPRC5BQ9NZH0 403 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 TSR3Q9UJK0 312 aaKnown RBP13.13□□□□□ -0.31
PTCH1-215ENST00000547672 MMP17Q9ULZ9 603 aa13.13□□□□□ -0.31
PTCH1-215ENST00000547672 PRPF19Q9UMS4 504 aaKnown RBP13.13□□□□□ -0.31
PTCH1-215ENST00000547672 COPG1Q9Y678 874 aaKnown RBP13.13□□□□□ -0.31
PTCH1-215ENST00000547672 COL4A3Q01955 1670 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 LOC100653049A0A140TA62 436 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 A0A1W2PQF6 199 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 A0A1W2PQU0 124 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 CACNB4O00305 520 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-215ENST00000547672 OR7A17O14581 309 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 KRT34O76011 436 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 PCCBP05166 539 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 CAPN1P07384 714 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 LINC00032P0C843 101 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 MYCLP1P12525 358 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-215ENST00000547672 ZNF8P17098 575 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-215ENST00000547672 RAP1GDS1P52306 607 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 ERVPABLB-1P60509 514 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 ERVK-8P63133 956 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 PCDH1Q08174 1060 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 LRRC32Q14392 662 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 SMAD2Q15796 467 aaKnown RBP13.12□□□□□ -0.31
PTCH1-215ENST00000547672 SNCBQ16143 134 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 KIF19Q2TAC6 998 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 MMEL1Q495T6 779 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 TMEM259Q4ZIN3 620 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 SCUBE1Q8IWY4 988 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 RBM15BQ8NDT2 890 aaKnown RBP13.12□□□□□ -0.31
PTCH1-215ENST00000547672 OR4F6Q8NGB9 312 aa13.12□□□□□ -0.31
PTCH1-215ENST00000547672 SETD7Q8WTS6 366 aaKnown RBP13.12□□□□□ -0.31
PTCH1-215ENST00000547672 DLG3Q92796 817 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms