RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 IKQ13123 557 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-224ENST00000545688 XKR6Q5GH73 641 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 TCTE1Q5JU00 501 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 DCAF10Q5QP82 559 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 KIAA0930Q6ICG6 404 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-224ENST00000545688 KLHL35Q6PF15 583 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 ZNF554Q86TJ5 538 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 ARID3BQ8IVW6 561 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-224ENST00000545688 SPAG16Q8N0X2 631 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 BMPERQ8N8U9 685 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 OR1J1Q8NGS3 322 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 OR2T11Q8NH01 316 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 FGFBP3Q8TAT2 258 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 TBC1D16Q8TBP0 767 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 HSD17B8Q92506 261 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 MOAP1Q96BY2 351 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 PPM1MQ96MI6 270 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 DACH2Q96NX9 599 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 PSMD1Q99460 953 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 TRAF4Q9BUZ4 470 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-224ENST00000545688 ABHD6Q9BV23 337 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 SH2D4AQ9H788 454 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 INTS9Q9NV88 658 aaKnown RBP4.1□□□□□ -1.75
SNHG1-224ENST00000545688 IRAK4Q9NWZ3 460 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 NPAP1Q9NZP6 1156 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 SESN1Q9Y6P5 492 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 FAM135BQ49AJ0 1406 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 A2ML1A8K2U0 1454 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 LRRC7Q96NW7 1537 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 FRMD3A2A2Y4 597 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 E9PQ18 207 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 NPHP1O15259 732 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 ATP6V0E1O15342 81 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 NDUFS4O43181 175 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 CDC123O75794 336 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-224ENST00000545688 MOCS3O95396 460 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 DDX58O95786 925 aaKnown RBP4.09□□□□□ -1.75
SNHG1-224ENST00000545688 PPARGP37231 505 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-224ENST00000545688 CDR2Q01850 454 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 PLA2G7Q13093 441 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 SPINK14Q6IE38 97 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 MMS22LQ6ZRQ5 1243 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 SCYL3Q8IZE3 742 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 CMTM3Q96MX0 182 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 LAT2Q9GZY6 243 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 KAT14Q9H8E8 782 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 FLRT3Q9NZU0 649 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 NENFQ9UMX5 172 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 PCDHGA5Q9Y5G8 931 aa4.09□□□□□ -1.75
SNHG1-224ENST00000545688 AGRNO00468 2067 aa4.09□□□□□ -1.76
SNHG1-224ENST00000545688 PRSS51A0A1B0GVH4 220 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 A0A1W2PRB8 838 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 MED19A0JLT2 244 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-224ENST00000545688 TPPPO94811 219 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 DNMT1P26358 1616 aaKnown RBP4.08□□□□□ -1.76
SNHG1-224ENST00000545688 SNRPEP62304 92 aaKnown RBP4.08□□□□□ -1.76
SNHG1-224ENST00000545688 SOS1Q07889 1333 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-224ENST00000545688 TROQ12816 1431 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-224ENST00000545688 CDK13Q14004 1512 aaKnown RBP4.08□□□□□ -1.76
SNHG1-224ENST00000545688 HNRNPDQ14103 355 aaKnown RBP4.08□□□□□ -1.76
SNHG1-224ENST00000545688 SUSD1Q6UWL2 747 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 TICAM1Q8IUC6 712 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 TEX11Q8IYF3 940 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 MYO3AQ8NEV4 1616 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 KBTBD8Q8NFY9 601 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 NSL1Q96IY1 281 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 FAM81BQ96LP2 452 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 SYT15Q9BQS2 421 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 HHATLQ9HCP6 504 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 ACKR4Q9NPB9 350 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 RPS10P5Q9NQ39 176 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 ORC3Q9UBD5 711 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-224ENST00000545688 KIDINS220Q9ULH0 1771 aa4.08□□□□□ -1.76
SNHG1-224ENST00000545688 PLXNC1O60486 1568 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 ABCC1P33527 1531 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 IGLV7-46A0A075B6I9 117 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 A0A1W2PR77 199 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 ELOVL7A1L3X0 281 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 SERINC4A6NH21 518 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 E9PI62 339 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 OR2C1O95371 312 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 LAMP2P13473 410 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 GABRB1P18505 474 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 PON1P27169 355 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 PRAMEP78395 509 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 PNRC1Q12796 327 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-224ENST00000545688 TEAD2Q15562 447 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 ZNF239Q16600 458 aaKnown RBP4.07□□□□□ -1.76
SNHG1-224ENST00000545688 CTU2Q2VPK5 515 aaKnown RBP4.07□□□□□ -1.76
SNHG1-224ENST00000545688 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 CPSF7Q8N684 471 aaKnown RBP4.07□□□□□ -1.76
SNHG1-224ENST00000545688 HPSE2Q8WWQ2 592 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 MAGED4Q96JG8 741 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 SGK494Q96LW2 274 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 AGAP3Q96P47 875 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 SRSF8Q9BRL6 282 aaKnown RBP4.07□□□□□ -1.76
SNHG1-224ENST00000545688 ITPAQ9BY32 194 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 FGFBP2Q9BYJ0 223 aa4.07□□□□□ -1.76
SNHG1-224ENST00000545688 RNF186Q9NXI6 227 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms