RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 XPO4Q9C0E2 1151 aaKnown RBP9.06□□□□□ -0.96
CHD4-212ENST00000545083 LHPPQ9H008 270 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 XKR8Q9H6D3 395 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 EPS8L2Q9H6S3 715 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 CBX8Q9HC52 389 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 MRPL47Q9HD33 250 aaKnown RBP9.06□□□□□ -0.96
CHD4-212ENST00000545083 ACSL5Q9ULC5 683 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 HS3ST3B1Q9Y662 390 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 AP1M2Q9Y6Q5 423 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 COLEC10Q9Y6Z7 277 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 CACNA1CQ13936 2221 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 NUP210LQ5VU65 1888 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 GLYATL1P3A0A0U1RQE8 302 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 LRRC53A6NM62 1247 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 UNC5CO95185 931 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 TPM2P07951 284 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 CD63P08962 238 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 CCDC172P0C7W6 258 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 MX2P20592 715 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 CAPN3P20807 821 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 MST1P26927 711 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 GJC1P36383 396 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 PPIDQ08752 370 aaKnown RBP9.05□□□□□ -0.96
CHD4-212ENST00000545083 MFAP5Q13361 173 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 KRT33BQ14525 404 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 PPP2R5EQ16537 467 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 LONRF2Q1L5Z9 754 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 TMEM207Q6UWW9 146 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 ISLR2Q6UXK2 745 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 APTXQ7Z2E3 356 aaKnown RBP9.05□□□□□ -0.96
CHD4-212ENST00000545083 FAM20CQ8IXL6 584 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 C19orf47Q8N9M1 422 aaKnown RBP9.05□□□□□ -0.96
CHD4-212ENST00000545083 OR52E1Q8NGJ3 308 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 DTX3LQ8TDB6 740 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 FAF2Q96CS3 445 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 C14orf79Q96F83 325 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 THOC3Q96J01 351 aaKnown RBP9.05□□□□□ -0.96
CHD4-212ENST00000545083 SPSB2Q99619 263 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 ZNF670Q9BS34 389 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 SLC25A51Q9H1U9 297 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 SMOXQ9NWM0 555 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 PLA2G3Q9NZ20 509 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 ACTR10Q9NZ32 417 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 UBP1Q9NZI7 540 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 IL17CQ9P0M4 197 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 LIMA1Q9UHB6 759 aaKnown RBP9.05□□□□□ -0.96
CHD4-212ENST00000545083 CDC23Q9UJX2 597 aa9.05□□□□□ -0.96
CHD4-212ENST00000545083 NCOA6Q14686 2063 aaPredicted RBP9.04□□□□□ -0.96
CHD4-212ENST00000545083 ZSCAN9O15535 394 aaPredicted RBP9.04□□□□□ -0.96
CHD4-212ENST00000545083 MAP3K7O43318 606 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 PMPCBO75439 489 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 NADKO95544 446 aaPredicted RBP9.04□□□□□ -0.96
CHD4-212ENST00000545083 MYBL1P10243 752 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 MSH3P20585 1137 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 AKT1P31749 480 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 SSR1P43307 286 aaKnown RBP9.04□□□□□ -0.96
CHD4-212ENST00000545083 CHRNA4P43681 627 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 GCGRP47871 477 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 TNFSF10P50591 281 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 TLE4Q04727 773 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 PTPRCAPQ14761 206 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 ASIC2Q16515 512 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 CT47A1Q5JQC4 288 aaPredicted RBP9.04□□□□□ -0.96
CHD4-212ENST00000545083 IRAK1BP1Q5VVH5 260 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 XKRXQ6PP77 449 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 SPESP1Q6UW49 350 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 SHISA6Q6ZSJ9 500 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 COX15Q7KZN9 410 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 CFAP206Q8IYR0 622 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 PLD5Q8N7P1 536 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 PHC3Q8NDX5 983 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 OR11G2Q8NGC1 345 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 FLVCR1-AS1Q8TAF5 88 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 N4BP2L2Q92802 583 aaPredicted RBP9.04□□□□□ -0.96
CHD4-212ENST00000545083 NACC2Q96BF6 587 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 MTFMTQ96DP5 389 aaKnown RBP9.04□□□□□ -0.96
CHD4-212ENST00000545083 FERD3LQ96RJ6 166 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 NDC1Q9BTX1 674 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 ISCUQ9H1K1 167 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 TFB2MQ9H5Q4 396 aaKnown RBP9.04□□□□□ -0.96
CHD4-212ENST00000545083 TXLNGQ9NUQ3 528 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 ANAPC7Q9UJX3 599 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 NEU2Q9Y3R4 380 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 HEBP2Q9Y5Z4 205 aa9.04□□□□□ -0.96
CHD4-212ENST00000545083 C2orf74A8MZ97 194 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 F10P00742 488 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 UGT2B7P16662 529 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 PRKCIP41743 596 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 TAS2R40P59535 323 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 ARG2P78540 354 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 AP1B1Q10567 949 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 PRKG2Q13237 762 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 SLC14A2Q15849 920 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 C3AR1Q16581 482 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 NKG7Q16617 165 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 TUBB8Q3ZCM7 444 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 BCL7AQ4VC05 210 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 MTFR2Q6P444 385 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 KDELC1Q6UW63 502 aa9.03□□□□□ -0.96
CHD4-212ENST00000545083 NCCRP1Q6ZVX7 275 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms