RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 KLHL9Q9P2J3 617 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 RNF150Q9ULK6 438 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SLIT3O75094 1523 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 RGPD2P0DJD1 1756 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 EVPLQ92817 2033 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 SHANK3Q9BYB0 1731 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 BLMP54132 1417 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-207ENST00000544052 SSH2Q76I76 1423 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 POLR3AO14802 1390 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-207ENST00000544052 PTPRCP08575 1304 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 PDS5AQ29RF7 1337 aaKnown RBP3.6□□□□□ -1.83
SCFD1-207ENST00000544052 MID1O15344 667 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 PPFIA2O75334 1257 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 MOSPD3O75425 235 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 RFPL2O75678 378 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 LINGO3P0C6S8 592 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 IGHV4-30-4P0DP06 118 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 MYOD1P15172 320 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 ARRB2P32121 409 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 PCGF2P35227 344 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 C21orf58P58505 322 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 ISL1P61371 349 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 CDK3Q00526 305 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 PPIGQ13427 754 aaKnown RBP eCLIP3.6□□□□□ -1.837e-8■■□□□ 12.4
SCFD1-207ENST00000544052 OASLQ15646 514 aaKnown RBP3.6□□□□□ -1.83
SCFD1-207ENST00000544052 LEXMQ3ZCV2 418 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 TDRD12Q587J7 1177 aaKnown RBP3.6□□□□□ -1.83
SCFD1-207ENST00000544052 KRT39Q6A163 491 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 ZNF425Q6IV72 752 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 RHBDF2Q6PJF5 856 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 IQCA1Q86XH1 822 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 MAP7D3Q8IWC1 876 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 ODF3L1Q8IXM7 274 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 ZNF713Q8N859 430 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-207ENST00000544052 IQUBQ8NA54 791 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 ARSGQ96EG1 525 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 TMEM79Q9BSE2 394 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 PIH1D3Q9NQM4 214 aaKnown RBP3.6□□□□□ -1.83
SCFD1-207ENST00000544052 IL17BQ9UHF5 180 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 CACNA1IQ9P0X4 2223 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 RGPD3A6NKT7 1758 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-207ENST00000544052 RGPD4Q7Z3J3 1758 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 CASZ1Q86V15 1759 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 COL3A1P02461 1466 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-207ENST00000544052 ARHGEF10O15013 1369 aa3.6□□□□□ -1.83
SCFD1-207ENST00000544052 IGLV5-52A0A0A0MRZ9 124 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 A0A0U1RQJ8 604 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 PRSS51A0A1B0GVH4 220 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 TMEM178BH3BS89 294 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 SLU7O95391 586 aaKnown RBP3.59□□□□□ -1.83
SCFD1-207ENST00000544052 S1PR1P21453 382 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 HOXC8P31273 242 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 HOXC13P31276 330 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 HSPA4P34932 840 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 RUNX1T1Q06455 604 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 MZT1Q08AG7 82 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 RAB6CQ53S08 254 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 C11orf87Q6NUJ2 197 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 ADCK2Q7Z695 626 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 GLCCI1Q86VQ1 547 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 GPATCH11Q8N954 259 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 EXD1Q8NHP7 514 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 THAP6Q8TBB0 222 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 SLC20A1Q8WUM9 679 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 KCNE4Q8WWG9 221 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 TANKQ92844 425 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 SPDL1Q96EA4 605 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 QRFPRQ96P65 431 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 INTS14Q96SY0 518 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 MGME1Q9BQP7 344 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 RAB6CQ9H0N0 254 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 DPAGT1Q9H3H5 408 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 NPAP1Q9NZP6 1156 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 RASAL2Q9UJF2 1139 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 TUBGCP6Q96RT7 1819 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 NFAT5O94916 1531 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 KIAA0232Q92628 1395 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 GOLGA6L9A6NEM1 432 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 OR6C76A6NM76 312 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 MEIS2O14770 477 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 KCNJ13O60928 360 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 GCNT3O95395 438 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 VDRP11473 427 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 PDGFRAP16234 1089 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 NR4A2P43354 598 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 ZNF155Q12901 538 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-207ENST00000544052 PLA2G7Q13093 441 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 MYBPHQ13203 477 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 NFE2L1Q14494 772 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 PTPRCAPQ14761 206 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 PLA2G4FQ68DD2 849 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 Q75L30 129 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 TMPRSS12Q86WS5 348 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 MFN1Q8IWA4 741 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 C1orf87Q8N0U7 546 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 PELI3Q8N2H9 469 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 C1orf52Q8N6N3 182 aaKnown RBP3.59□□□□□ -1.83
SCFD1-207ENST00000544052 OR52I2Q8NH67 350 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 DNAAF4Q8WXU2 420 aa3.59□□□□□ -1.83
SCFD1-207ENST00000544052 ABTB1Q969K4 478 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms