RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 ZADH2Q8N4Q0 377 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 PHC3Q8NDX5 983 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 OR2Y1Q8NGV0 311 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 HEXDCQ8WVB3 486 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 UBE2Q2Q8WVN8 375 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 P3H4Q92791 437 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 PTERQ96BW5 349 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 ULK4Q96C45 1275 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 GBP5Q96PP8 586 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 ZBTB20Q9HC78 741 aaPredicted RBP19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 ACTR10Q9NZ32 417 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 GPN3Q9UHW5 284 aaPredicted RBP19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 CRLS1Q9UJA2 301 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 TRHDEQ9UKU6 1024 aa19.3■□□□□ 0.68
LPCAT3-211ENST00000543794 OR2B3O76000 313 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 ATP1B2P14415 290 aaPredicted RBP19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 FOLR3P41439 243 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 DCDP81605 110 aaKnown RBP19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 KAZNQ674X7 775 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 SPESP1Q6UW49 350 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 RANBP10Q6VN20 620 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 NXPE1Q8N323 547 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 ST6GALNAC3Q8NDV1 305 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 PROKR1Q8TCW9 393 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 CHRNA10Q9GZZ6 450 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 SPRTNQ9H040 489 aaPredicted RBP19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 DEF6Q9H4E7 631 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 ATP13A2Q9NQ11 1180 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 RSPH14Q9UHP6 348 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 HYOU1Q9Y4L1 999 aa19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.29■□□□□ 0.68
LPCAT3-211ENST00000543794 CFAP99D6REC4 459 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 MASP2O00187 686 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 HCRTR1O43613 425 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 AKR1B10O60218 316 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 COMTP21964 271 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 PDHA2P29803 388 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 GABRA4P48169 554 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 MSLNQ13421 630 aaPredicted RBP19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 BOP1Q14137 746 aaKnown RBP19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 C1orf189Q5VU69 101 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 MRPL14Q6P1L8 145 aaKnown RBP19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 PPP1R32Q7Z5V6 425 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 SRRM1Q8IYB3 904 aaKnown RBP19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 OR8K1Q8NGG5 319 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 N4BP2L2Q92802 583 aaPredicted RBP19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.28■□□□□ 0.682e-6■■■■■ 54.9
LPCAT3-211ENST00000543794 QKIQ96PU8 341 aaKnown RBP eCLIP19.28■□□□□ 0.682e-7■■■■■ 30.3
LPCAT3-211ENST00000543794 COPS8Q99627 209 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 C19orf43Q9BQ61 176 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 GORASP1Q9BQQ3 440 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 FICDQ9BVA6 458 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 AP1M1Q9BXS5 423 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 XKR8Q9H6D3 395 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 AGPAT4Q9NRZ5 378 aa19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 IFT80Q9P2H3 777 aaPredicted RBP19.28■□□□□ 0.68
LPCAT3-211ENST00000543794 HACD1B0YJ81 288 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 CNOT3O75175 753 aaKnown RBP19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 ANXA9O76027 345 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 ADRA1AP35348 466 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 GEMP55040 296 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 RPA4Q13156 261 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 PRKG2Q13237 762 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 ZIC1Q15915 447 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 SNX20Q7Z614 316 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 KCNMB4Q86W47 210 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 C19orf47Q8N9M1 422 aaKnown RBP19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 TFGQ92734 400 aaPredicted RBP19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 DNAJC7Q99615 494 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 GBA3Q9H227 469 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 FAM96AQ9H5X1 160 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 IFNKQ9P0W0 207 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 NDOR1Q9UHB4 597 aa19.27■□□□□ 0.68
LPCAT3-211ENST00000543794 IGLV3-16A0A075B6K0 115 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 CRTAMO95727 393 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 UMODP07911 640 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 ITGALP20701 1170 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 TCEAL1Q15170 157 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 TFDP3Q5H9I0 405 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 CAVIN1Q6NZI2 390 aaKnown RBP19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 HOOK3Q86VS8 718 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 OR13C4Q8NGS5 318 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 NACC2Q96BF6 587 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 OR2A14Q96R47 310 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 HGH1Q9BTY7 390 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 ZDHHC3Q9NYG2 299 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 DHCR7Q9UBM7 475 aaKnown RBP19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 ICKQ9UPZ9 632 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 CDYLQ9Y232 598 aa19.26■□□□□ 0.67
LPCAT3-211ENST00000543794 AGPSO00116 658 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 LRRTM2O43300 516 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 PSTPIP1O43586 416 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 SPOPO43791 374 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 CTSBP07858 339 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 UGT2B7P16662 529 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 ELAVL4P26378 380 aaKnown RBP19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 FOXL2P58012 376 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 AIMP2Q13155 320 aaKnown RBP19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 OLIG2Q13516 323 aa19.25■□□□□ 0.67
LPCAT3-211ENST00000543794 CYP2A13Q16696 494 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms