RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CAPGP40121 348 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 RPS9P46781 194 aaKnown RBP6.42□□□□□ -1.38
PTPRO-208ENST00000542557 GBX1Q14549 363 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 GGTA1PQ4G0N0 100 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 GLYATQ6IB77 296 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 CRTC1Q6UUV9 634 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 USP45Q70EL2 814 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 LRRC70Q7Z2Q7 622 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 TMC8Q8IU68 726 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 BBS7Q8IWZ6 715 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 TCAIMQ8N3R3 496 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 DTWD1Q8N5C7 304 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 CLDN19Q8N6F1 224 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 POP5Q969H6 163 aaKnown RBP6.42□□□□□ -1.38
PTPRO-208ENST00000542557 ULK4Q96C45 1275 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 DTNBP1Q96EV8 351 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 SCRN2Q96FV2 425 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 APOL5Q9BWW9 433 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 YTHDF1Q9BYJ9 559 aaKnown RBP6.42□□□□□ -1.38
PTPRO-208ENST00000542557 CRISPLD2Q9H0B8 497 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 GORASP2Q9H8Y8 452 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 HS3ST2Q9Y278 367 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 PRKAB1Q9Y478 270 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 HELZP42694 1942 aaKnown RBP6.42□□□□□ -1.38
PTPRO-208ENST00000542557 PLXNB3Q9ULL4 1909 aa6.42□□□□□ -1.38
PTPRO-208ENST00000542557 ANKRD12Q6UB98 2062 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 A0A1W2PQ67 120 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 CCDC160A6NGH7 325 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 MANBAO00462 879 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 LILRB3O75022 631 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 ULK1O75385 1050 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 DEAF1O75398 565 aaPredicted RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 RSL1D1O76021 490 aaKnown RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 ANXA5P08758 320 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 RAP2AP10114 183 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 SRCP12931 536 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 SLC2A4P14672 509 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 HOXB6P17509 224 aaKnown RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 UGT1A1P22309 533 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 UGT1A4P22310 534 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 PRPH2P23942 346 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 CD70P32970 193 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 UGT1A3P35503 534 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 UGT1A5P35504 534 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 GNPDA1P46926 289 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 CDK9P50750 372 aaKnown RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 DGKKQ5KSL6 1271 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 CACHD1Q5VU97 1274 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 AP1ARQ63HQ0 302 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 USP51Q70EK9 711 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 GAREM2Q75VX8 874 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 PATL1Q86TB9 770 aaKnown RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 FAM9CQ8IZT9 166 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 PAF1Q8N7H5 531 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 GTF2H4Q92759 462 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 VWCEQ96DN2 955 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 MPP4Q96JB8 637 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 PPM1MQ96MI6 270 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 HBEGFQ99075 208 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 SH3GL1Q99961 368 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 CHID1Q9BWS9 393 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 CPEB1Q9BZB8 566 aaKnown RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 CEP44Q9C0F1 390 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 CLMPQ9H6B4 373 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 LRTM1Q9HBL6 345 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 CFAP97Q9P2B7 532 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 RSL24D1Q9UHA3 163 aaKnown RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 INTS6Q9UL03 887 aaKnown RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 TRAV19A0A0A6YYK7 116 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 ABHD14A-ACY1A0A1B0GW23 586 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 H0YAE9 185 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 ZNF701M0R085 212 aaPredicted RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 TEX28O15482 410 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 CLOCKO15516 846 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 NUAK1O60285 661 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 LZTS3O60299 673 aaPredicted RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 STK16O75716 305 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 HPRP00739 348 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 KRT6AP02538 564 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 KRT6BP04259 564 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 C8GP07360 202 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 GNAO1P09471 354 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 MPC1LP0DKB6 136 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 ACPPP15309 386 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 GKP32189 559 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 PPM1AP35813 382 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 KRT6CP48668 564 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 HNRNPFP52597 415 aaKnown RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 DGKQP52824 942 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 MTPNP58546 118 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 CYP4F8P98187 520 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 SP140Q13342 867 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 SELPLGQ14242 412 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 FAM98BQ52LJ0 330 aaKnown RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 LRRC66Q68CR7 880 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 C22orf39Q6P5X5 142 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 TTC33Q6PID6 262 aaPredicted RBP6.41□□□□□ -1.38
PTPRO-208ENST00000542557 ABRAXAS1Q6UWZ7 409 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 SLC39A5Q6ZMH5 540 aa6.41□□□□□ -1.38
PTPRO-208ENST00000542557 TSPAN33Q86UF1 283 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms