RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ALKBH8Q96BT7 664 aaKnown RBP22.54■■□□□ 1.2
HOMER3-205ENST00000542541 NXNL1Q96CM4 212 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 FERD3LQ96RJ6 166 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 TRIT1Q9H3H1 467 aaKnown RBP22.54■■□□□ 1.2
HOMER3-205ENST00000542541 SIRPGQ9P1W8 387 aa22.54■■□□□ 1.2
HOMER3-205ENST00000542541 ZNF624Q9P2J8 865 aaPredicted RBP22.54■■□□□ 1.2
HOMER3-205ENST00000542541 CFAP20Q9Y6A4 193 aaKnown RBP22.54■■□□□ 1.2
HOMER3-205ENST00000542541 FOXO6A8MYZ6 492 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 GFYI3L273 518 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 BTN3A1O00481 513 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 PSIP1O75475 530 aaKnown RBP22.53■■□□□ 1.2
HOMER3-205ENST00000542541 VIPP01282 170 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 GSTA1P08263 222 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 MAP4P27816 1152 aaKnown RBP22.53■■□□□ 1.2
HOMER3-205ENST00000542541 RPIAP49247 311 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 ACAP2Q15057 778 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 SH2D5Q6ZV89 423 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 CLEC14AQ86T13 490 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 EID2Q8N6I1 236 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 FAM181AQ8N9Y4 354 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 GPR156Q8NFN8 814 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 SLC37A2Q8TED4 501 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 ZFPM2Q8WW38 1151 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 TRIM54Q9BYV2 358 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 TFB2MQ9H5Q4 396 aaKnown RBP22.53■■□□□ 1.2
HOMER3-205ENST00000542541 RXFP3Q9NSD7 469 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 IGSF5Q9NSI5 407 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 POT1Q9NUX5 634 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 CPNE7Q9UBL6 633 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 POLG2Q9UHN1 485 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 ACTL7BQ9Y614 415 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 PABPN1LA6NDY0 278 aaKnown RBP22.53■■□□□ 1.2
HOMER3-205ENST00000542541 TRIM38O00635 465 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 KDM1AO60341 852 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 NOBOXO60393 691 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 SLC19A1P41440 591 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 SLC18A2Q05940 514 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 C14orf28Q4W4Y0 310 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 UBE2R2Q712K3 238 aaPredicted RBP22.53■■□□□ 1.2
HOMER3-205ENST00000542541 ADAMTSL2Q86TH1 951 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 C17orf82Q86X59 251 aaPredicted RBP22.53■■□□□ 1.2
HOMER3-205ENST00000542541 RBM12BQ8IXT5 1001 aaKnown RBP22.53■■□□□ 1.2
HOMER3-205ENST00000542541 OR5K2Q8NHB8 316 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 MCOLN3Q8TDD5 553 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 KIAA1191Q96A73 305 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 SLC12A9Q9BXP2 914 aa22.53■■□□□ 1.2
HOMER3-205ENST00000542541 COPEO14579 308 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 ENO2P09104 434 aaPredicted RBP22.52■■□□□ 1.2
HOMER3-205ENST00000542541 CYP2A7P20853 494 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 DLG1Q12959 904 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 AGBL2Q5U5Z8 902 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 DCUN1D3Q8IWE4 304 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 C4orf33Q8N1A6 199 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 ARL14Q8N4G2 192 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 PHC3Q8NDX5 983 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 STAG3L4Q8TBR4 150 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 PATE1Q8WXA2 126 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 RAD51AP1Q96B01 352 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 SH3KBP1Q96B97 665 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 SH3GL2Q99962 352 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 PARVBQ9HBI1 364 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 EVA1BQ9NVM1 165 aa22.52■■□□□ 1.2
HOMER3-205ENST00000542541 NOVA2Q9UNW9 492 aaKnown RBP22.52■■□□□ 1.2
HOMER3-205ENST00000542541 ZFHX2Q9C0A1 2572 aaPredicted RBP22.51■■□□□ 1.19
HOMER3-205ENST00000542541 C4orf47A7E2U8 309 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 CDC7O00311 574 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 SIGLEC6O43699 453 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 GLRA3O75311 464 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 C1orf105O95561 183 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 RBP1P09455 135 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 HIST1H2AGP0C0S8 130 aaPredicted RBP22.51■■□□□ 1.19
HOMER3-205ENST00000542541 TFEBP19484 476 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 HIST1H2ADP20671 130 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 CRHR1P34998 444 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 GMPRP36959 345 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 FASLGP48023 281 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 UBE2IP63279 158 aaKnown RBP22.51■■□□□ 1.19
HOMER3-205ENST00000542541 HHEXQ03014 270 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 ISCA2Q86U28 154 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 RASGRP3Q8IV61 690 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 PLD6Q8N2A8 252 aaKnown RBP22.51■■□□□ 1.19
HOMER3-205ENST00000542541 FBXO15Q8NCQ5 510 aaPredicted RBP22.51■■□□□ 1.19
HOMER3-205ENST00000542541 RHEBL1Q8TAI7 183 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 HIST1H2AHQ96KK5 128 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 HIST1H2AJQ99878 128 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 H2AFJQ9BTM1 129 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 IQCGQ9H095 443 aaKnown RBP22.51■■□□□ 1.19
HOMER3-205ENST00000542541 SLC40A1Q9NP59 571 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 GRID1Q9ULK0 1009 aa22.51■■□□□ 1.19
HOMER3-205ENST00000542541 TSNQ15631 228 aaKnown RBP22.5■■□□□ 1.19
HOMER3-205ENST00000542541 EXOC3L1Q86VI1 746 aa22.5■■□□□ 1.19
HOMER3-205ENST00000542541 SLC35F3Q8IY50 421 aa22.5■■□□□ 1.19
HOMER3-205ENST00000542541 KYQ8NBH2 561 aa22.5■■□□□ 1.19
HOMER3-205ENST00000542541 OR6C4Q8NGE1 309 aa22.5■■□□□ 1.19
HOMER3-205ENST00000542541 OR5AR1Q8NGP9 310 aa22.5■■□□□ 1.19
HOMER3-205ENST00000542541 RHBDD1Q8TEB9 315 aa22.5■■□□□ 1.19
HOMER3-205ENST00000542541 SETD7Q8WTS6 366 aaKnown RBP22.5■■□□□ 1.19
HOMER3-205ENST00000542541 APOLD1Q96LR9 279 aa22.5■■□□□ 1.19
HOMER3-205ENST00000542541 GPR78Q96P69 363 aa22.5■■□□□ 1.19
HOMER3-205ENST00000542541 UNKQ9C0B0 810 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms