RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 CPLX3Q8WVH0 158 aa8.65□□□□□ -1.02
UBC-211ENST00000542416 TFB1MQ8WVM0 346 aaKnown RBP8.65□□□□□ -1.02
UBC-211ENST00000542416 DLG3Q92796 817 aa8.65□□□□□ -1.02
UBC-211ENST00000542416 INPP5DQ92835 1189 aa8.65□□□□□ -1.02
UBC-211ENST00000542416 FCRL5Q96RD9 977 aa8.65□□□□□ -1.02
UBC-211ENST00000542416 C19orf43Q9BQ61 176 aa8.65□□□□□ -1.02
UBC-211ENST00000542416 NDC1Q9BTX1 674 aa8.65□□□□□ -1.02
UBC-211ENST00000542416 ASB8Q9H765 288 aa8.65□□□□□ -1.02
UBC-211ENST00000542416 CHST11Q9NPF2 352 aa8.65□□□□□ -1.02
UBC-211ENST00000542416 ACTR10Q9NZ32 417 aa8.65□□□□□ -1.02
UBC-211ENST00000542416 COPG2Q9UBF2 871 aa8.65□□□□□ -1.02
UBC-211ENST00000542416 FAM8A1Q9UBU6 413 aa8.65□□□□□ -1.02
UBC-211ENST00000542416 NOVA2Q9UNW9 492 aaKnown RBP8.65□□□□□ -1.02
UBC-211ENST00000542416 GOLGA6L22H0YM25 854 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 BTN3A3O00478 584 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 GAPDHSO14556 408 aaPredicted RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 DDX3YO15523 660 aaKnown RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 ZG16O60844 167 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 SRP72O76094 671 aaKnown RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 ALBP02768 609 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 CBSLP0DN79 551 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 PRF1P14222 555 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 ATP1B2P14415 290 aaPredicted RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 MMP11P24347 488 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 CBSP35520 551 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 ARSFP54793 590 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 TYRO3Q06418 890 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 ZNF169Q14929 603 aaPredicted RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 PRKD1Q15139 912 aaPredicted RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 TAF1AQ15573 450 aaPredicted RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 SLC5A12Q1EHB4 618 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.64□□□□□ -1.03
UBC-211ENST00000542416 RPUSD3Q6P087 351 aaKnown RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 MRPL14Q6P1L8 145 aaKnown RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 PID1Q7Z2X4 250 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 GDF7Q7Z4P5 450 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 PPP1R32Q7Z5V6 425 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 BCORP1Q8N888 145 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 IPMKQ8NFU5 416 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 OR52E1Q8NGJ3 308 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 RELTQ969Z4 430 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 FKBP10Q96AY3 582 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 MRGPRX2Q96LB1 330 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 COPS8Q99627 209 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 FERMT1Q9BQL6 677 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 UNKQ9C0B0 810 aaKnown RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 WDR54Q9H977 334 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 MRM3Q9HC36 420 aaKnown RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 IRAK4Q9NWZ3 460 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 DDX56Q9NY93 547 aaKnown RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 OR6C2Q9NZP2 312 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 KLHL8Q9P2G9 620 aaPredicted RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 SUCOQ9UBS9 1254 aaKnown RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 CRLS1Q9UJA2 301 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 NXT1Q9UKK6 140 aaKnown RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 TRHDEQ9UKU6 1024 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 CAPN11Q9UMQ6 739 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 NTNG1Q9Y2I2 539 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 LUC7L2Q9Y383 392 aaKnown RBP8.64□□□□□ -1.03
UBC-211ENST00000542416 CSMD1Q96PZ7 3565 aa8.64□□□□□ -1.03
UBC-211ENST00000542416 TNRC6AQ8NDV7 1962 aaKnown RBP8.63□□□□□ -1.03
UBC-211ENST00000542416 FBN2P35556 2912 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 C3orf70A6NLC5 250 aaPredicted RBP8.63□□□□□ -1.03
UBC-211ENST00000542416 AGAP14A8MT82 685 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 E2F3O00716 465 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 GPR39O43194 453 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 BUD23O43709 281 aaKnown RBP8.63□□□□□ -1.03
UBC-211ENST00000542416 ANXA9O76027 345 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 CRTAMO95727 393 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 NFKB1P19838 968 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 ITGALP20701 1170 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 HNRNPH3P31942 346 aaKnown RBP8.63□□□□□ -1.03
UBC-211ENST00000542416 CD68P34810 354 aaPredicted RBP8.63□□□□□ -1.03
UBC-211ENST00000542416 SHMT2P34897 504 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 SLC1A1P43005 524 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 CHRNA4P43681 627 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 DYNLT1P63172 113 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 TPM4P67936 248 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 OTUD4Q01804 1114 aaKnown RBP8.63□□□□□ -1.03
UBC-211ENST00000542416 MESDQ14696 234 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 HIF1AQ16665 826 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 GPR33Q49SQ1 333 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 ANO6Q4KMQ2 910 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 C1orf189Q5VU69 101 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 YOD1Q5VVQ6 348 aaPredicted RBP8.63□□□□□ -1.03
UBC-211ENST00000542416 NPNTQ6UXI9 565 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 DAAM2Q86T65 1068 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 ZC3H18Q86VM9 953 aaKnown RBP8.63□□□□□ -1.03
UBC-211ENST00000542416 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 ADGRF3Q8IZF5 1079 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 OR4K2Q8NGD2 314 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 TFGQ92734 400 aaPredicted RBP8.63□□□□□ -1.03
UBC-211ENST00000542416 LRRC45Q96CN5 670 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 CNDP1Q96KN2 507 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 NAP1L5Q96NT1 182 aaPredicted RBP8.63□□□□□ -1.03
UBC-211ENST00000542416 GBP4Q96PP9 640 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 LMF1Q96S06 567 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 SLX1AQ9BQ83 275 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 LHPPQ9H008 270 aa8.63□□□□□ -1.03
UBC-211ENST00000542416 KLHL25Q9H0H3 589 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms