RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ADIPOR2Q86V24 386 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 COMMD2Q86X83 199 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 FAM114A1Q8IWE2 563 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 TAGAPQ8N103 731 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 MAPKAPK5-AS1Q8N8E1 139 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 A4GALTQ9NPC4 353 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 ZNF701Q9NV72 531 aaPredicted RBP5.38□□□□□ -1.55
YBX3-210ENST00000540975 INTS9Q9NV88 658 aaKnown RBP5.38□□□□□ -1.55
YBX3-210ENST00000540975 FLRT3Q9NZU0 649 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 GPR34Q9UPC5 381 aa5.38□□□□□ -1.55
YBX3-210ENST00000540975 LOC100509620A0A075B734 347 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 IGKV3D-15A0A087WSY6 115 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 HYKKA2RU49 373 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 GAPDHSO14556 408 aaPredicted RBP5.37□□□□□ -1.55
YBX3-210ENST00000540975 ENTPD3O75355 529 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 TRMUO75648 421 aaKnown RBP5.37□□□□□ -1.55
YBX3-210ENST00000540975 FAM157CP0CG43 387 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 GJA1P17302 382 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 SAT1P21673 171 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 DMPKQ09013 629 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 GRAPQ13588 217 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 ZFP69Q49AA0 526 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 TEX38Q6PEX7 206 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 ZNF497Q6ZNH5 498 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 ZNF611Q8N823 705 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 OR13J1Q8NGT2 312 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 FGFBP3Q8TAT2 258 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 SLC22A18Q96BI1 424 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 WBP1Q96G27 269 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 GMPPAQ96IJ6 420 aaPredicted RBP5.37□□□□□ -1.55
YBX3-210ENST00000540975 NSL1Q96IY1 281 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 ART5Q96L15 291 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 LMF2Q9BU23 707 aaKnown RBP5.37□□□□□ -1.55
YBX3-210ENST00000540975 FNDC11Q9BVV2 318 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 EGLN1Q9GZT9 426 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 WBP11Q9Y2W2 641 aaKnown RBP5.37□□□□□ -1.55
YBX3-210ENST00000540975 RIPK3Q9Y572 518 aa5.37□□□□□ -1.55
YBX3-210ENST00000540975 LOC102723996A0A087X1L8 192 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 GPR75-ASB3A0A0A6YYF3 556 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 LOC101059948A0A1B0GTJ6 334 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 A0A1W2PN81 502 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 MEIOCA2RUB1 952 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 ZNF197O14709 1029 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 AP2A2O94973 939 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 HMBSP08397 361 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 SLC6A6P31641 620 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 CHRNA7P36544 502 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 STAT2P52630 851 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 CX3CL1P78423 397 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 C15orf59Q2T9L4 293 aaPredicted RBP5.36□□□□□ -1.55
YBX3-210ENST00000540975 ARHGEF16Q5VV41 709 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 CEP57L1Q8IYX8 460 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 GUF1Q8N442 669 aaKnown RBP5.36□□□□□ -1.55
YBX3-210ENST00000540975 TRIML1Q8N9V2 468 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 ZNF485Q8NCK3 441 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 MCUQ8NE86 351 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 MRGPRDQ8TDS7 321 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 ZNF599Q96NL3 588 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 LAT2Q9GZY6 243 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 GIMAP4Q9NUV9 329 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 ATAD3AQ9NVI7 634 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 CACNG5Q9UF02 275 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 RASAL2Q9UJF2 1139 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 ZHX1Q9UKY1 873 aaPredicted RBP5.36□□□□□ -1.55
YBX3-210ENST00000540975 MTUS1Q9ULD2 1270 aa5.36□□□□□ -1.55
YBX3-210ENST00000540975 ANKUB1A6NFN9 424 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 OR10H2O60403 315 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 TSPAN1O60635 241 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 BCL10O95999 233 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 TPOP07202 933 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 CEBPBP17676 345 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 CA4P22748 312 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 BMXP51813 675 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 TPD52P55327 224 aaPredicted RBP5.35□□□□□ -1.55
YBX3-210ENST00000540975 SNX16P57768 344 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 B3GALT5-AS1P59052 145 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 IRX1P78414 480 aaPredicted RBP5.35□□□□□ -1.55
YBX3-210ENST00000540975 CDR2Q01850 454 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 PRKCZQ05513 592 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 GPR17Q13304 367 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 LINC00346Q8IVM7 164 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 HPSE2Q8WWQ2 592 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 IRGQQ8WZA9 623 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 RSRC1Q96IZ7 334 aaKnown RBP5.35□□□□□ -1.55
YBX3-210ENST00000540975 OLFM1Q99784 485 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 WDR13Q9H1Z4 485 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 SDR39U1Q9NRG7 319 aaPredicted RBP5.35□□□□□ -1.55
YBX3-210ENST00000540975 TMEM181Q9P2C4 612 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 ZDHHC2Q9UIJ5 367 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 TUBE1Q9UJT0 475 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 PCDHGB4Q9UN71 923 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 GRIP1Q9Y3R0 1128 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 NME7Q9Y5B8 376 aa5.35□□□□□ -1.55
YBX3-210ENST00000540975 IGHV4-4A0A075B6R2 117 aa5.34□□□□□ -1.55
YBX3-210ENST00000540975 A0A1B0GU03 582 aa5.34□□□□□ -1.55
YBX3-210ENST00000540975 SLCO1B7G3V0H7 640 aa5.34□□□□□ -1.55
YBX3-210ENST00000540975 GFPT2O94808 682 aa5.34□□□□□ -1.55
YBX3-210ENST00000540975 WDPCPO95876 746 aa5.34□□□□□ -1.55
YBX3-210ENST00000540975 RAF1P04049 648 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms