RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 TBCBQ99426 244 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 TBCDQ9BTW9 1192 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 PIGUQ9H490 435 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 ELOVL6Q9H5J4 265 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 POMKQ9H5K3 350 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 AGO1Q9UL18 857 aaKnown RBP12.22□□□□□ -0.45
USP3-203ENST00000538686 SCML1Q9UN30 329 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 MAGED1Q9Y5V3 778 aaPredicted RBP12.22□□□□□ -0.45
USP3-203ENST00000538686 V9GYH0 126 aa12.22□□□□□ -0.45
USP3-203ENST00000538686 WTIPA6NIX2 430 aaPredicted RBP12.21□□□□□ -0.45
USP3-203ENST00000538686 WASH4PA8MWX3 477 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 MED7O43513 233 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 CA12O43570 354 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 APOL3O95236 402 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 MRPL19P49406 292 aaKnown RBP12.21□□□□□ -0.45
USP3-203ENST00000538686 RARRES1P49788 294 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 ERVFC1P60507 584 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 EMX2Q04743 252 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 POU4F3Q15319 338 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 UGT3A2Q3SY77 523 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 ZMAT1Q5H9K5 638 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 PPP1R26Q5T8A7 1209 aaPredicted RBP12.21□□□□□ -0.45
USP3-203ENST00000538686 MZT2BQ6NZ67 158 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 BLOC1S3Q6QNY0 202 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 SPESP1Q6UW49 350 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 B3GNT9Q6UX72 402 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 USP50Q70EL3 339 aaPredicted RBP12.21□□□□□ -0.45
USP3-203ENST00000538686 LUZP2Q86TE4 346 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 WDR18Q9BV38 432 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 RHOJQ9H4E5 214 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 IL1RAPQ9NPH3 570 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 ACSS2Q9NR19 701 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 MED9Q9NWA0 146 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 RDH8Q9NYR8 311 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 FIS1Q9Y3D6 152 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 ALG5Q9Y673 324 aa12.21□□□□□ -0.45
USP3-203ENST00000538686 LOC100506127A0A0U1RQW1 187 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 hCG_1807616A0A1W2PRN6 198 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 WASHC1A8K0Z3 465 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 M0R082 166 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 HUS1O60921 280 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 EEDO75530 441 aaKnown RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 GLRBP48167 497 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 MEOX2P50222 304 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 ARHGDIBP52566 201 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 RPS6KA2Q15349 733 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 BAK1Q16611 211 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 PTPN20Q4JDL3 420 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 TSTD2Q5T7W7 516 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 ANKRD54Q6NXT1 300 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 HTR3DQ70Z44 454 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 TMEM135Q86UB9 458 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 TXNRD3Q86VQ6 643 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 TSPYL5Q86VY4 417 aaPredicted RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 ARRDC4Q8NCT1 418 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 OR4D10Q8NGI6 311 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 ZNF431Q8TF32 576 aaPredicted RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 ZNF669Q96BR6 464 aaPredicted RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 ARL5BQ96KC2 179 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 SORCS2Q96PQ0 1159 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 RIT2Q99578 217 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 FAM213AQ9BRX8 229 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 MLPHQ9BV36 600 aaPredicted RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 BBS2Q9BXC9 721 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 C11orf54Q9H0W9 315 aaPredicted RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 OSBPL2Q9H1P3 480 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 SDR39U1Q9NRG7 319 aaPredicted RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 OLA1Q9NTK5 396 aaKnown RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 TMEM45AQ9NWC5 275 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 LEF1Q9UJU2 399 aaPredicted RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 GINS2Q9Y248 185 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 ASB4Q9Y574 426 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 V9GYQ6 96 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 A0A087X1B8 175 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 ANKRD28O15084 1053 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 INPPL1O15357 1258 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 ST8SIA5O15466 376 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 ORC5O43913 435 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 VPS4BO75351 444 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 LYPLA2O95372 231 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 DNTTP04053 509 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 CYBBP04839 570 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 PSAPP07602 524 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 ALDOCP09972 364 aaKnown RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 SLC35E2BP0CK96 405 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 CYP19A1P11511 503 aaPredicted RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 IRF3Q14653 427 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 MICAQ29983 383 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 LRFN4Q6PJG9 635 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 PAMR1Q6UXH9 720 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 FAM183BPQ6ZVS7 135 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 LRRTM3Q86VH5 581 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 SLC22A9Q8IVM8 553 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 CDYL2Q8N8U2 506 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 OR6M1Q8NGM8 313 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 DNAJB14Q8TBM8 379 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 ZFPM2Q8WW38 1151 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 DDX17Q92841 729 aaKnown RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 SIPA1Q96FS4 1042 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms