RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SLC46A2Q9BY10 475 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 DPY30Q9C005 99 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 KCTD5Q9NXV2 234 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 ZDHHC3Q9NYG2 299 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 AGAP14A8MT82 685 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 MANBAO00462 879 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 EBLN1P0CF75 366 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 CCL5P13501 91 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 MYF6P23409 242 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 HSPA14Q0VDF9 509 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 SPANXN4Q5MJ08 99 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 OFCC1Q8IZS5 231 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 UBTD2Q8WUN7 234 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 C19orf43Q9BQ61 176 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 NTMT1Q9BV86 223 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 LRTM1Q9HBL6 345 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 TBX21Q9UL17 535 aa24.38■■□□□ 1.49
RAB40C-204ENST00000538492 SLC28A1O00337 649 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 PCNAP12004 261 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 MAP7Q14244 749 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 MAPKAPK3Q16644 382 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 SUSD1Q6UWL2 747 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 DPY19L3Q6ZPD9 716 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 METTL3Q86U44 580 aaKnown RBP24.37■■□□□ 1.49
RAB40C-204ENST00000538492 ZNF583Q96ND8 569 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 THUMPD3Q9BV44 507 aaKnown RBP24.37■■□□□ 1.49
RAB40C-204ENST00000538492 RDH14Q9HBH5 336 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-204ENST00000538492 SLCO3A1Q9UIG8 710 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 SLC8A2Q9UPR5 921 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 CEPT1Q9Y6K0 416 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 IFRD1O00458 451 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-204ENST00000538492 ANXA5P08758 320 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 DYNC1I2Q13409 638 aaKnown RBP24.37■■□□□ 1.49
RAB40C-204ENST00000538492 TBPL2Q6SJ96 375 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 MYLIPQ8WY64 445 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 GTF2H4Q92759 462 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 IKZF5Q9H5V7 419 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 ACTR8Q9H981 624 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 DDX18Q9NVP1 670 aaKnown RBP24.37■■□□□ 1.49
RAB40C-204ENST00000538492 TRPS1Q9UHF7 1281 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 PDE10AQ9Y233 779 aa24.37■■□□□ 1.49
RAB40C-204ENST00000538492 KRT87PA6NCN2 255 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 LILRB3O75022 631 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 C8AP07357 584 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 AKT1P31749 480 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 RPS9P46781 194 aaKnown RBP24.36■■□□□ 1.49
RAB40C-204ENST00000538492 OTUD3Q5T2D3 398 aaPredicted RBP24.36■■□□□ 1.49
RAB40C-204ENST00000538492 CACHD1Q5VU97 1274 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 ASTLQ6HA08 431 aaPredicted RBP24.36■■□□□ 1.49
RAB40C-204ENST00000538492 PRR23BQ6ZRT6 265 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 TRIM46Q7Z4K8 759 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 OR10A6Q8NH74 314 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 ITFG1Q8TB96 612 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 FIG4Q92562 907 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 ECHDC3Q96DC8 303 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 CDH2P19022 906 aaPredicted RBP24.36■■□□□ 1.49
RAB40C-204ENST00000538492 MAD2L1Q13257 205 aaPredicted RBP24.36■■□□□ 1.49
RAB40C-204ENST00000538492 TMEM214Q6NUQ4 689 aaKnown RBP24.36■■□□□ 1.49
RAB40C-204ENST00000538492 TMEM25Q86YD3 366 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 OSCP1Q8WVF1 389 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 LMLNQ96KR4 655 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 TOX2Q96NM4 488 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 YME1L1Q96TA2 773 aa24.36■■□□□ 1.49
RAB40C-204ENST00000538492 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.36■■□□□ 1.49
RAB40C-204ENST00000538492 SMPD3Q9NY59 655 aaPredicted RBP24.36■■□□□ 1.49
RAB40C-204ENST00000538492 CLOCKO15516 846 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 SNAP29O95721 258 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 PGRP06401 933 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 CDH1P12830 882 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 EPORP19235 508 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 PCSK6P29122 969 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 VEGFBP49765 207 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 MNX1P50219 401 aaPredicted RBP24.35■■□□□ 1.49
RAB40C-204ENST00000538492 ZXDCQ2QGD7 858 aaPredicted RBP24.35■■□□□ 1.49
RAB40C-204ENST00000538492 UBE2R2Q712K3 238 aaPredicted RBP24.35■■□□□ 1.49
RAB40C-204ENST00000538492 CHCHD4Q8N4Q1 142 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 HM13Q8TCT9 377 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 SLC22A17Q8WUG5 538 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 PYCR2Q96C36 320 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 HS3ST2Q9Y278 367 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 FADS3Q9Y5Q0 445 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 KIAA1671Q9BY89 1806 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 MTX2O75431 263 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 CLDN9O95484 217 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 GGT1P19440 569 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 EP400NLQ6ZTU2 488 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 Q6ZVU0 165 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 RIMKLAQ8IXN7 391 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 CHST14Q8NCH0 376 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 OR2T12Q8NG77 320 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 OR8J3Q8NGG0 315 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 BPIFB1Q8TDL5 484 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 BEGAINQ9BUH8 593 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 HCFC1R1Q9NWW0 138 aa24.35■■□□□ 1.49
RAB40C-204ENST00000538492 ABHD14A-ACY1A0A1B0GW23 586 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 FGF18O76093 207 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 ANXA6P08133 673 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 C1SP09871 688 aa24.34■■□□□ 1.49
RAB40C-204ENST00000538492 NEK2P51955 445 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms