RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ASB11Q8WXH4 323 aa13.71□□□□□ -0.21
LIMK1-208ENST00000538333 MRGPRX3Q96LB0 322 aa13.71□□□□□ -0.21
LIMK1-208ENST00000538333 CGREF1Q99674 301 aa13.71□□□□□ -0.21
LIMK1-208ENST00000538333 SPATA16Q9BXB7 569 aa13.71□□□□□ -0.21
LIMK1-208ENST00000538333 SLC29A3Q9BZD2 475 aa13.71□□□□□ -0.21
LIMK1-208ENST00000538333 SLC32A1Q9H598 525 aa13.71□□□□□ -0.21
LIMK1-208ENST00000538333 RPF2Q9H7B2 306 aaKnown RBP13.71□□□□□ -0.21
LIMK1-208ENST00000538333 ARL15Q9NXU5 204 aa13.71□□□□□ -0.21
LIMK1-208ENST00000538333 PKD2L2Q9NZM6 624 aa13.71□□□□□ -0.21
LIMK1-208ENST00000538333 CXXC1Q9P0U4 656 aaPredicted RBP13.71□□□□□ -0.21
LIMK1-208ENST00000538333 ERVW-1Q9UQF0 538 aa13.71□□□□□ -0.21
LIMK1-208ENST00000538333 HCFC2Q9Y5Z7 792 aa13.71□□□□□ -0.21
LIMK1-208ENST00000538333 INPP4BO15327 924 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 SGTAO43765 313 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 TFAP2AP05549 437 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 C8GP07360 202 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 ATP1B2P14415 290 aaPredicted RBP13.71□□□□□ -0.22
LIMK1-208ENST00000538333 GNPDA1P46926 289 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 CCT8P50990 548 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 OR4D2P58180 307 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 HSPA14Q0VDF9 509 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 MAD2L1Q13257 205 aaPredicted RBP13.71□□□□□ -0.22
LIMK1-208ENST00000538333 SELPLGQ14242 412 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 CYP51A1Q16850 503 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 PLA2G4EQ3MJ16 856 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 ARHGAP15Q53QZ3 475 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 NHSL2Q5HYW2 709 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 ISLR2Q6UXK2 745 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 SERPINA13PQ6UXR4 307 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 UBE2R2Q712K3 238 aaPredicted RBP13.71□□□□□ -0.22
LIMK1-208ENST00000538333 DET1Q7L5Y6 550 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 GALNT13Q8IUC8 556 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 PPM1MQ96MI6 270 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 EPB41L1Q9H4G0 881 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 PARVBQ9HBI1 364 aa13.71□□□□□ -0.22
LIMK1-208ENST00000538333 EIF3LQ9Y262 564 aaKnown RBP13.71□□□□□ -0.22
LIMK1-208ENST00000538333 MYO7AQ13402 2215 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 ARHGAP10A1A4S6 786 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 TSPAN11A1L157 253 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 GFYI3L273 518 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 DLGAP1O14490 977 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 PGM3O95394 542 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 CLDN9O95484 217 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 FESP07332 822 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 MPC1LP0DKB6 136 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 FASP25445 335 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 VIPR1P32241 457 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 PEX19P40855 299 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 SLC6A12P48065 614 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 DCDC1P59894 354 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 PWP1Q13610 501 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 AASDHQ4L235 1098 aaPredicted RBP13.7□□□□□ -0.22
LIMK1-208ENST00000538333 PRSS36Q5K4E3 855 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 SUSD1Q6UWL2 747 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 RTL10Q7L3V2 364 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 LRRC70Q7Z2Q7 622 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 HSD11B1LQ7Z5J1 315 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 HOMEZQ8IX15 550 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 PACRGLQ8N7B6 248 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 SP7Q8TDD2 431 aaPredicted RBP13.7□□□□□ -0.22
LIMK1-208ENST00000538333 SCAMP4Q969E2 229 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 CENPNQ96H22 339 aaPredicted RBP13.7□□□□□ -0.22
LIMK1-208ENST00000538333 ZSWIM3Q96MP5 696 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 HEPHQ9BQS7 1158 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 LRTM1Q9HBL6 345 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 MARK1Q9P0L2 795 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 TBC1D14Q9P2M4 693 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 PCDHB3Q9Y5E6 796 aa13.7□□□□□ -0.22
LIMK1-208ENST00000538333 KCNE1BA0A087WTH5 132 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 EME2A4GXA9 379 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-208ENST00000538333 FAM149AA5PLN7 773 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 SAC3D1A6NKF1 404 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 SOBPA7XYQ1 873 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 LEFTY1O75610 366 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 ARHGEF15O94989 841 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 UMPSP11172 480 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 BMPR1AP36894 532 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 RECQLP46063 649 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-208ENST00000538333 MTPNP58546 118 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 NTHL1P78549 312 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 APOFQ13790 326 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 GGTA1PQ4G0N0 100 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 PLEKHS1Q5SXH7 462 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 SATL1Q86VE3 508 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 PROSER1Q86XN7 944 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 RASGRP3Q8IV61 690 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 TCAIMQ8N3R3 496 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 LIX1Q8N485 282 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 MFSD2AQ8NA29 543 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 SLC13A3Q8WWT9 602 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 SORCS1Q8WY21 1168 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 ACPTQ9BZG2 426 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 VAPAQ9P0L0 249 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 WNT6Q9Y6F9 365 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 MYOCOSA0A1B0GUC4 107 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 TTC34A8MYJ7 566 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 ACOX3O15254 700 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 TPST1O60507 370 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 MTX2O75431 263 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 CTSLP07711 333 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms