RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 FAM26EQ8N5C1 309 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 CLDN19Q8N6F1 224 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 LRRC57Q8N9N7 239 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 PHC3Q8NDX5 983 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 ACRBPQ8NEB7 543 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 OR1L3Q8NH93 324 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 STYXQ8WUJ0 223 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 N4BP2L2Q92802 583 aaPredicted RBP9.39□□□□□ -0.91
CHD4-207ENST00000537634 CDKN2AIPNLQ96HQ2 116 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 MRFAP1L1Q96HT8 127 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 NLNQ9BYT8 704 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 KLHL25Q9H0H3 589 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 XKR8Q9H6D3 395 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 PCMTD2Q9NV79 361 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 ACTR10Q9NZ32 417 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 SMARCAL1Q9NZC9 954 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 TCFL5Q9UL49 500 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 REXO2Q9Y3B8 237 aaKnown RBP9.39□□□□□ -0.91
CHD4-207ENST00000537634 MAST4O15021 2626 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 BSNQ9UPA5 3926 aa9.39□□□□□ -0.91
CHD4-207ENST00000537634 SPTBP11277 2137 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 NAV2Q8IVL1 2488 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 CCDC78A2IDD5 438 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 CLEC18AA5D8T8 446 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 LIN7AO14910 233 aaPredicted RBP9.38□□□□□ -0.91
CHD4-207ENST00000537634 VPS4BO75351 444 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 TMEM63AO94886 807 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 METTL18O95568 372 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 AP2A1O95782 977 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 GAS8O95995 478 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 FTH1P02794 183 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 HBQ1P09105 142 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 AGXTP21549 392 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 MSNP26038 577 aaKnown RBP9.38□□□□□ -0.91
CHD4-207ENST00000537634 SHMT2P34897 504 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 NSG1P42857 185 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 ITIH4Q14624 930 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 NCF4Q15080 339 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 PTCHD3Q3KNS1 767 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 SYTL3Q4VX76 610 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 ZNF789Q5FWF6 425 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 LCN10Q6JVE6 187 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 SPESP1Q6UW49 350 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 CLEC18BQ6UXF7 455 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 MICALCLQ6ZW33 695 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 LINC00523Q86TU6 105 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 PIANPQ8IYJ0 282 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 ADGRF3Q8IZF5 1079 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 TXLNBQ8N3L3 684 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 TAB3Q8N5C8 712 aaPredicted RBP9.38□□□□□ -0.91
CHD4-207ENST00000537634 CLEC18CQ8NCF0 446 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 ADAMTS17Q8TE56 1095 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 ELMO1Q92556 727 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHD4-207ENST00000537634 TRAPPC9Q96Q05 1148 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 NRTNQ99748 197 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 DPH2Q9BQC3 489 aaPredicted RBP9.38□□□□□ -0.91
CHD4-207ENST00000537634 TMEM121Q9BTD3 319 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 PIH1D1Q9NWS0 290 aaKnown RBP9.38□□□□□ -0.91
CHD4-207ENST00000537634 VPS4AQ9UN37 437 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 PACSIN2Q9UNF0 486 aaPredicted RBP9.38□□□□□ -0.91
CHD4-207ENST00000537634 ICKQ9UPZ9 632 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 ASF1AQ9Y294 204 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 PADI2Q9Y2J8 665 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 ZNF451Q9Y4E5 1061 aa9.38□□□□□ -0.91
CHD4-207ENST00000537634 MED13Q9UHV7 2174 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 MROH6A6NGR9 719 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 F8W8V4 182 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 ZNF749O43361 778 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 KDM1AO60341 852 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 OR2B3O76000 313 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 FTCDO95954 541 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 OR56A5P0C7T3 313 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 RRADP55042 308 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 GDF10P55107 478 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 KIF5AQ12840 1032 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 KLF1Q13351 362 aaPredicted RBP9.37□□□□□ -0.91
CHD4-207ENST00000537634 BRD3Q15059 726 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 NADK2Q4G0N4 442 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 CCDC38Q502W7 563 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 FAM69BQ5VUD6 431 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 PAPD7Q5XG87 772 aaKnown RBP9.37□□□□□ -0.91
CHD4-207ENST00000537634 PACS1Q6VY07 963 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 CDHR3Q6ZTQ4 885 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 MED25Q71SY5 747 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 RAB43Q86YS6 212 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 C19orf47Q8N9M1 422 aaKnown RBP9.37□□□□□ -0.91
CHD4-207ENST00000537634 TMEM102Q8N9M5 508 aaPredicted RBP9.37□□□□□ -0.91
CHD4-207ENST00000537634 DNAAF3Q8N9W5 541 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 OR5AR1Q8NGP9 310 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 SLC35B2Q8TB61 432 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 CPT1CQ8TCG5 803 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 TCTN2Q96GX1 697 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 TTC1Q99614 292 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 BAG1Q99933 345 aaPredicted RBP9.37□□□□□ -0.91
CHD4-207ENST00000537634 C17orf62Q9BQA9 187 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 DHRS4Q9BTZ2 278 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 MLXIPLQ9NP71 852 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 POLG2Q9UHN1 485 aa9.37□□□□□ -0.91
CHD4-207ENST00000537634 R3HDM2Q9Y2K5 976 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms