RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 HCAR2Q8TDS4 363 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 PTERQ96BW5 349 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 BIRC8Q96P09 236 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLIP1-208ENST00000537004 TAS2R13Q9NYV9 303 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 B4GALT6Q9UBX8 382 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 BAIAP2L1Q9UHR4 511 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 TAGLN3Q9UI15 199 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 KLK13Q9UKR3 277 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 MED16Q9Y2X0 877 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 USP24Q9UPU5 2620 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 GOLGA4Q13439 2230 aaKnown RBP11.72□□□□□ -0.53
CLIP1-208ENST00000537004 A0A0J9YYE9 177 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 SPTY2D1-AS1A0A0U1RR47 76 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 GYG2O15488 501 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 FFAR2O15552 330 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 MAGEC1O60732 1142 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 TRBC1P01850 177 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 DGKAP23743 735 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 CPA2P48052 419 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 KCNC1P48547 511 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 XIAPP98170 497 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 IRF4Q15306 451 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 TCEA2Q15560 299 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 AARS2Q5JTZ9 985 aaKnown RBP11.72□□□□□ -0.53
CLIP1-208ENST00000537004 GLRX5Q86SX6 157 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 SLC22A9Q8IVM8 553 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 PELI3Q8N2H9 469 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 PLA2G15Q8NCC3 412 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 FUBP1Q96AE4 644 aaKnown RBP11.72□□□□□ -0.53
CLIP1-208ENST00000537004 PHF21BQ96EK2 531 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 CADM1Q9BY67 442 aaKnown RBP11.72□□□□□ -0.53
CLIP1-208ENST00000537004 TCEAL2Q9H3H9 227 aaPredicted RBP11.72□□□□□ -0.53
CLIP1-208ENST00000537004 GPR27Q9NS67 375 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 TAS2R1Q9NYW7 299 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 VTI1BQ9UEU0 232 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.72□□□□□ -0.53
CLIP1-208ENST00000537004 OR1A2Q9Y585 309 aa11.72□□□□□ -0.53
CLIP1-208ENST00000537004 C1orf232A0A0U1RR37 186 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 F8W8V4 182 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 SLCO1B7G3V0H7 640 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 H3BMM5 538 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 TRIM38O00635 465 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 GRID2O43424 1007 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 LZTS3O60299 673 aaPredicted RBP11.71□□□□□ -0.53
CLIP1-208ENST00000537004 OR1I1O60431 355 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 MYF5P13349 255 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 GM2AP17900 193 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 NCF2P19878 526 aaPredicted RBP11.71□□□□□ -0.53
CLIP1-208ENST00000537004 CLDN6P56747 220 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 SHC2P98077 582 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 PAQR3Q6TCH7 311 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 LIPIQ6XZB0 460 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 TAS2R42Q7RTR8 314 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 TEX9Q8N6V9 391 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 CDC6Q99741 560 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 SYTL2Q9HCH5 934 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 TCF7L2Q9NQB0 619 aa11.71□□□□□ -0.53
CLIP1-208ENST00000537004 GOLGA8QA0A0J9YX86 632 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 GOLGA8OA6NCC3 632 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 B2RBV5 119 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 E9PBE3 544 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 GOLGA8NF8WBI6 632 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 SCAMP1O15126 338 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 GSC2O15499 205 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 GPR39O43194 453 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 KLHL41O60662 606 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 SMIM24O75264 130 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 RECQL5O94762 991 aaPredicted RBP11.7□□□□□ -0.54
CLIP1-208ENST00000537004 PCCBP05166 539 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 ELFN1P0C7U0 828 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 PKMP14618 531 aaKnown RBP11.7□□□□□ -0.54
CLIP1-208ENST00000537004 RABIFP47224 123 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 NFKB2Q00653 900 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 CACNG1Q06432 222 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 EIF2B5Q13144 721 aaKnown RBP11.7□□□□□ -0.54
CLIP1-208ENST00000537004 INPP5AQ14642 412 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 OR4D1Q15615 310 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 METTL21CQ5VZV1 264 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 FRMD7Q6ZUT3 714 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 TSPAN33Q86UF1 283 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 RBFAQ8N0V3 343 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 OXR1Q8N573 874 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 FAM13CQ8NE31 585 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 DENND6BQ8NEG7 585 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 FBXO27Q8NI29 283 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 RHEBL1Q8TAI7 183 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 ASB12Q8WXK4 309 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 EXT2Q93063 718 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 CNDP2Q96KP4 475 aaKnown RBP11.7□□□□□ -0.54
CLIP1-208ENST00000537004 PPP1R36Q96LQ0 422 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 OR52B2Q96RD2 323 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 GPR21Q99679 349 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 NUF2Q9BZD4 464 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 WDR55Q9H6Y2 383 aaPredicted RBP11.7□□□□□ -0.54
CLIP1-208ENST00000537004 ZFYVE1Q9HBF4 777 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 FTSJ1Q9UET6 329 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 SUFUQ9UMX1 484 aa11.7□□□□□ -0.54
CLIP1-208ENST00000537004 OAS3Q9Y6K5 1087 aaKnown RBP11.7□□□□□ -0.54
CLIP1-208ENST00000537004 SLC30A1Q9Y6M5 507 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms