RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 HGFP14210 728 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ATP5DP30049 168 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ETV5P41161 510 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 PPM1FP49593 454 aaPredicted RBP11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 GABREP78334 506 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 GRB7Q14451 532 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 KRT33BQ14525 404 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 EFTUD2Q15029 972 aaKnown RBP eCLIP11□□□□□ -0.659e-7■■■■■ 38
TNFRSF1A-208ENST00000536194 SNAP47Q5SQN1 464 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 C3orf62Q6ZUJ4 267 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CYS1Q717R9 158 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 RAB11FIP2Q7L804 512 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ZC3HC1Q86WB0 502 aaKnown RBP11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 PALM2Q8IXS6 379 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 OR4E2Q8NGC2 313 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 OR5K2Q8NHB8 316 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CFAP61Q8NHU2 1237 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 IFT81Q8WYA0 676 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 NXPE2Q96DL1 559 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 TGM7Q96PF1 710 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 DPYSL5Q9BPU6 564 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 RHOXF2Q9BQY4 288 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 FAM129AQ9BZQ8 928 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 RAB33BQ9H082 229 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ZMYND15Q9H091 742 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CCDC68Q9H2F9 335 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 TFB2MQ9H5Q4 396 aaKnown RBP11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 XKR8Q9H6D3 395 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ZFATQ9P243 1243 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 EPHA6Q9UF33 1036 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 KLHL3Q9UH77 587 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CIDEBQ9UHD4 219 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 PLAGL1Q9UM63 463 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 COMMD10Q9Y6G5 202 aa11□□□□□ -0.65
TNFRSF1A-208ENST00000536194 FAM159BA6NKW6 160 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 A8MU76 341 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 BTN3A3O00478 584 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 BTN3A1O00481 513 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 PLD2O14939 933 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 BRINP1O60477 761 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 MATN4O95460 622 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 C1orf105O95561 183 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 GSTA2P09210 222 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ITIH1P19827 911 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 BDKRB1P46663 353 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 LSSP48449 732 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 KPNA2P52292 529 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CYP4F3Q08477 520 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 TRA2AQ13595 282 aaKnown RBP eCLIP10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 KLHL38Q2WGJ6 581 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CCSMST1Q4G0I0 132 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 IRGCQ6NXR0 463 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 UNC5DQ6UXZ4 953 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 FAM92BQ6ZTR7 304 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 STRA8Q7Z7C7 330 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 SLC26A11Q86WA9 606 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 PLXDC1Q8IUK5 500 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 RELL1Q8IUW5 271 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CPNE9Q8IYJ1 553 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ADGRF3Q8IZF5 1079 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 LMNTD1Q8N9Z9 388 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 WDR36Q8NI36 951 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 GABPB2Q8TAK5 448 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 LCN9Q8WX39 176 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 PPM1MQ96MI6 270 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CNTNAP3BQ96NU0 1288 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 FMO2Q99518 471 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 OLFM1Q99784 485 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CNTNAP3Q9BZ76 1288 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 TWSG1Q9GZX9 223 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 TRIT1Q9H3H1 467 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 SRMSQ9H3Y6 488 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 POLR1BQ9H9Y6 1135 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ASCL3Q9NQ33 180 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 NINJ2Q9NZG7 142 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 KLHL42Q9P2K6 505 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 TDRKHQ9Y2W6 561 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 LOXL2Q9Y4K0 774 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 PCDHGA8Q9Y5G5 932 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 WDFY3Q8IZQ1 3526 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 FRYQ5TBA9 3013 aa10.99□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ANKRD12Q6UB98 2062 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 IGHV5-51A0A0C4DH38 117 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 TMX2-CTNND1H3BSU7 103 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 TAF4O00268 1085 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 HGSO14964 777 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 VPS26AO75436 327 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 DXOO77932 396 aaKnown RBP10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ANKRD34CP0C6C1 535 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 FGF3P11487 239 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CCL4P13236 92 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 POLR2CP19387 275 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CD9P21926 228 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 FDXRP22570 491 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 PEBP1P30086 187 aaKnown RBP10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 PKLRP30613 574 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 KYNUQ16719 465 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 KBTBD12Q3ZCT8 623 aa10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.98□□□□□ -0.65
TNFRSF1A-208ENST00000536194 DNTTIP2Q5QJE6 756 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms