RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 HYAL3O43820 417 aaPredicted RBP11.74□□□□□ -0.53
CHD4-203ENST00000535717 UBXN7O94888 489 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 MATN4O95460 622 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 MT-CO3P00414 261 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 ABHD2P08910 425 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 TPBGLP0DKB5 382 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 TYRP1P17643 537 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 SAT1P21673 171 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 CSF2RBP32927 897 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 MAPK9P45984 424 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 LIMK2P53671 638 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 TAS2R39P59534 338 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 GPLD1P80108 840 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 ILF2Q12905 390 aaKnown RBP11.74□□□□□ -0.53
CHD4-203ENST00000535717 FOXC1Q12948 553 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 SPIDRQ14159 915 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 NAA30Q147X3 362 aaPredicted RBP11.74□□□□□ -0.53
CHD4-203ENST00000535717 KLHL38Q2WGJ6 581 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 PAQR3Q6TCH7 311 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 UNC5DQ6UXZ4 953 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 TMPRSS9Q7Z410 1059 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 TMPRSS12Q86WS5 348 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 MARCH9Q86YJ5 346 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 TBC1D21Q8IYX1 336 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 OR10G6Q8NH81 332 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 OR5K2Q8NHB8 316 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 WDR48Q8TAF3 677 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 EEF1AKMT1Q8WVE0 214 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 GPR22Q99680 433 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 NUDT22Q9BRQ3 303 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 RDH14Q9HBH5 336 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 WASF3Q9UPY6 502 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 PTPRBP23467 1997 aa11.74□□□□□ -0.53
CHD4-203ENST00000535717 FAM149AA5PLN7 773 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 EIF3FO00303 357 aaPredicted RBP11.73□□□□□ -0.53
CHD4-203ENST00000535717 DUX1O43812 170 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 ABCB7O75027 752 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 TCEA3O75764 348 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 CPNE6O95741 557 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 PROS1P07225 676 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 MPC1LP0DKB6 136 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 CBSLP0DN79 551 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 ENO3P13929 434 aaPredicted RBP11.73□□□□□ -0.53
CHD4-203ENST00000535717 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
CHD4-203ENST00000535717 SPRP35270 261 aaPredicted RBP11.73□□□□□ -0.53
CHD4-203ENST00000535717 CBSP35520 551 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 PDX1P52945 283 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 POU4F1Q01851 419 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 PDAP1Q13442 181 aaKnown RBP11.73□□□□□ -0.53
CHD4-203ENST00000535717 ZNF460Q14592 562 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 PLCL1Q15111 1095 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 TMEM207Q6UWW9 146 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 CYHR1Q6ZMK1 362 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 ZNF574Q6ZN55 896 aaPredicted RBP11.73□□□□□ -0.53
CHD4-203ENST00000535717 RBM44Q6ZP01 1051 aaKnown RBP11.73□□□□□ -0.53
CHD4-203ENST00000535717 NEK10Q6ZWH5 1172 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 TMPRSS7Q7RTY8 843 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 PIWIL4Q7Z3Z4 852 aaKnown RBP11.73□□□□□ -0.53
CHD4-203ENST00000535717 CEP97Q8IW35 865 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 DCBLD1Q8N8Z6 715 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 OR4E2Q8NGC2 313 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 OR52E1Q8NGJ3 308 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 SLC44A1Q8WWI5 657 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 LCN9Q8WX39 176 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 NCSTNQ92542 709 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 RSC1A1Q92681 617 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 AHCYL2Q96HN2 611 aaKnown RBP11.73□□□□□ -0.53
CHD4-203ENST00000535717 PARD6BQ9BYG5 372 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 EPB41L1Q9H4G0 881 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 TFB2MQ9H5Q4 396 aaKnown RBP11.73□□□□□ -0.53
CHD4-203ENST00000535717 CAB39LQ9H9S4 337 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 TMEM9Q9P0T7 183 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 POLG2Q9UHN1 485 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 SLC39A10Q9ULF5 831 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 CLCA2Q9UQC9 943 aa11.73□□□□□ -0.53
CHD4-203ENST00000535717 TDRKHQ9Y2W6 561 aaKnown RBP11.73□□□□□ -0.53
CHD4-203ENST00000535717 KNTC1P50748 2209 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 HMX2A2RU54 273 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 OR6C74A6NCV1 312 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 CTIFO43310 598 aaKnown RBP11.72□□□□□ -0.53
CHD4-203ENST00000535717 CSO75390 466 aaKnown RBP11.72□□□□□ -0.53
CHD4-203ENST00000535717 PSIP1O75475 530 aaKnown RBP11.72□□□□□ -0.53
CHD4-203ENST00000535717 C1orf105O95561 183 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 TSPAN12O95859 305 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 RPN2P04844 631 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 ITGA2BP08514 1039 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 ADRB1P08588 477 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 JUPP14923 745 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 AMD1P17707 334 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 SPINK2P20155 84 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 BDKRB1P46663 353 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 CAPZBP47756 277 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 PPM1FP49593 454 aaPredicted RBP11.72□□□□□ -0.53
CHD4-203ENST00000535717 IL2P60568 153 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 TARDBPQ13148 414 aaKnown RBP eCLIP11.72□□□□□ -0.53
CHD4-203ENST00000535717 GRB7Q14451 532 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 SLC29A2Q14542 456 aa11.72□□□□□ -0.53
CHD4-203ENST00000535717 USP10Q14694 798 aaKnown RBP11.72□□□□□ -0.53
CHD4-203ENST00000535717 UAP1Q16222 522 aaPredicted RBP11.72□□□□□ -0.53
CHD4-203ENST00000535717 CLPPQ16740 277 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms