RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 LIN7AO14910 233 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 SLC4A1P02730 911 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 POLR2CP19387 275 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 ITGALP20701 1170 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 CDH3P22223 829 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 ACRV1P26436 265 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 RBL1P28749 1068 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 AKT1P31749 480 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 CTNNA1P35221 906 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 ITIH4Q14624 930 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 PTPRCAPQ14761 206 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 DCAF10Q5QP82 559 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 ANKRD20A2Q5SQ80 823 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 FAM182AQ5T1J6 154 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 ANKRD20A1Q5TYW2 823 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 ANKRD20A3Q5VUR7 823 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 TLDC1Q6P9B6 456 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 CDHR3Q6ZTQ4 885 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 MRGPREQ86SM8 312 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 ZC3H18Q86VM9 953 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 AMIGO1Q86WK6 493 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 CCDC170Q8IYT3 715 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 LILRA3Q8N6C8 439 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 OR52E1Q8NGJ3 308 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 TFGQ92734 400 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 DCUN1D1Q96GG9 259 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 FER1L6-AS2Q96M78 137 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 SPATA13Q96N96 652 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 ZNF285Q96NJ3 590 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 TLR10Q9BXR5 811 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 AP1M1Q9BXS5 423 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 POLG2Q9UHN1 485 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 RIMKLBQ9ULI2 386 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 SRPK3Q9UPE1 567 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 B3GNT3Q9Y2A9 372 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 PCDHA3Q9Y5H8 950 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 KLK4Q9Y5K2 254 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 CFAP20Q9Y6A4 193 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 POLQO75417 2590 aa10.85□□□□□ -0.67
CLSTN3-206ENST00000535668 DOCK10Q96BY6 2186 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 MROH6A6NGR9 719 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 TMEM150CB9EJG8 249 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 C9J4A7 227 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 IFRD1O00458 451 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 ZNF749O43361 778 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 FKBP9O95302 570 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 ALBP02768 609 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 ALPPP05187 535 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 TPM1P09493 284 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 CYP2A7P20853 494 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 AGXTP21549 392 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 SHMT2P34897 504 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 NSG1P42857 185 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 DCDP81605 110 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 SLC5A12Q1EHB4 618 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 ZRANB3Q5FWF4 1079 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 PRAMEF17Q5VTA0 474 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 YOD1Q5VVQ6 348 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 DUS1LQ6P1R4 473 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 B4GALNT4Q76KP1 1039 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 MAMDC2Q7Z304 686 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 DAAM2Q86T65 1068 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 TBC1D21Q8IYX1 336 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 IQCKQ8N0W5 287 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 DNAJC22Q8N4W6 341 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 ACTL9Q8TC94 416 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 DENND1AQ8TEH3 1009 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 UBE2Q2Q8WVN8 375 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 PEX13Q92968 403 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 FKBP10Q96AY3 582 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 PTERQ96BW5 349 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 SNRNP40Q96DI7 357 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 CLIP3Q96DZ5 547 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 OR2A14Q96R47 310 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 ZNF552Q9H707 407 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 WDR54Q9H977 334 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 SLAMF7Q9NQ25 335 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 LUC7LQ9NQ29 371 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 NLE1Q9NVX2 485 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 SOHLH2Q9NX45 425 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 CRLS1Q9UJA2 301 aa10.84□□□□□ -0.67
CLSTN3-206ENST00000535668 SVILO95425 2214 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 A0A1W2PQ72 361 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 SLC5A10A0PJK1 596 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 CCDC66A2RUB6 948 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 PJA2O43164 708 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 BUD23O43709 281 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 AP2A1O95782 977 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 RNF224P0DH78 156 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 TPBGLP0DKB5 382 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 PDHA2P29803 388 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 MARCKSL1P49006 195 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 CACNG1Q06432 222 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 CHAF1BQ13112 559 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 ATP1A4Q13733 1029 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 PRPSAP1Q14558 356 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 GSE1Q14687 1217 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 KIR2DS3Q14952 304 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 PARP6Q2NL67 630 aa10.83□□□□□ -0.68
CLSTN3-206ENST00000535668 PLEKHN1Q494U1 663 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms