RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 KIR3DX1Q9H7L2 352 aa12.78□□□□□ -0.36
TMEM258-202ENST00000535042 MVB12BQ9H7P6 319 aa12.78□□□□□ -0.36
TMEM258-202ENST00000535042 RDH14Q9HBH5 336 aa12.78□□□□□ -0.36
TMEM258-202ENST00000535042 CIDEBQ9UHD4 219 aa12.78□□□□□ -0.36
TMEM258-202ENST00000535042 RAB21Q9UL25 225 aa12.78□□□□□ -0.36
TMEM258-202ENST00000535042 SLC39A10Q9ULF5 831 aa12.78□□□□□ -0.36
TMEM258-202ENST00000535042 COLEC10Q9Y6Z7 277 aa12.78□□□□□ -0.36
TMEM258-202ENST00000535042 ASXL3Q9C0F0 2248 aa12.78□□□□□ -0.36
TMEM258-202ENST00000535042 KRT87PA6NCN2 255 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 POC1B-GALNT4F8VUJ3 575 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 HYAL3O43820 417 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-202ENST00000535042 WISP3O95389 354 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-202ENST00000535042 C1orf105O95561 183 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 MT-CO3P00414 261 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 ITGA2BP08514 1039 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 MPC1LP0DKB6 136 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 CDK4P11802 303 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-202ENST00000535042 NDUFS1P28331 727 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 GCAP28676 217 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 SPRP35270 261 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-202ENST00000535042 GMPRP36959 345 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 BDKRB1P46663 353 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 PDX1P52945 283 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 EPHA4P54764 986 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 POU4F1Q01851 419 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 FOXC1Q12948 553 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
TMEM258-202ENST00000535042 SQSTM1Q13501 440 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 BMPR2Q13873 1038 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 USP10Q14694 798 aaKnown RBP12.77□□□□□ -0.37
TMEM258-202ENST00000535042 UNC5DQ6UXZ4 953 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 ZNF574Q6ZN55 896 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-202ENST00000535042 NEK10Q6ZWH5 1172 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 OR5K2Q8NHB8 316 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 SKA2Q8WVK7 121 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-202ENST00000535042 RSC1A1Q92681 617 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 GFM1Q96RP9 751 aaKnown RBP12.77□□□□□ -0.37
TMEM258-202ENST00000535042 PAFAH2Q99487 392 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 TRIT1Q9H3H1 467 aaKnown RBP12.77□□□□□ -0.37
TMEM258-202ENST00000535042 XKR8Q9H6D3 395 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 TMEM9Q9P0T7 183 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 IKZF3Q9UKT9 509 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 PLAGL1Q9UM63 463 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 WASF3Q9UPY6 502 aa12.77□□□□□ -0.37
TMEM258-202ENST00000535042 TDRKHQ9Y2W6 561 aaKnown RBP12.77□□□□□ -0.37
TMEM258-202ENST00000535042 FAM149AA5PLN7 773 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 ARHGEF33A8MVX0 844 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 PHGDHO43175 533 aaKnown RBP12.76□□□□□ -0.37
TMEM258-202ENST00000535042 PSIP1O75475 530 aaKnown RBP12.76□□□□□ -0.37
TMEM258-202ENST00000535042 UBXN7O94888 489 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 SHBGP04278 402 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 PROS1P07225 676 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 CBSLP0DN79 551 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 ENO3P13929 434 aaPredicted RBP12.76□□□□□ -0.37
TMEM258-202ENST00000535042 ZNF37AP17032 561 aaPredicted RBP12.76□□□□□ -0.37
TMEM258-202ENST00000535042 SPINK2P20155 84 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 MPSTP25325 297 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 CBSP35520 551 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 GPLD1P80108 840 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 SPIDRQ14159 915 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 PLCL1Q15111 1095 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 ZKSCAN8Q15776 578 aaPredicted RBP12.76□□□□□ -0.37
TMEM258-202ENST00000535042 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.76□□□□□ -0.37
TMEM258-202ENST00000535042 TMPRSS7Q7RTY8 843 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 B3GNT8Q7Z7M8 397 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 LMNTD1Q8N9Z9 388 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 OR4E2Q8NGC2 313 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 OR10G6Q8NH81 332 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 DCAKDQ8WVC6 231 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 ANKRD49Q8WVL7 239 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 ASB11Q8WXH4 323 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 NCSTNQ92542 709 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 DLG3Q92796 817 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 LINGO1Q96FE5 620 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 DHRS4Q9BTZ2 278 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 MENTQ9BUN1 341 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 SEMA6CQ9H3T2 930 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 TFB2MQ9H5Q4 396 aaKnown RBP12.76□□□□□ -0.37
TMEM258-202ENST00000535042 ICKQ9UPZ9 632 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 RP1P56715 2156 aa12.76□□□□□ -0.37
TMEM258-202ENST00000535042 EXOC1LA0A1B0GW35 172 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 OR6C74A6NCV1 312 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 D6RAR5 112 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 GFYI3L273 518 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 EIF3FO00303 357 aaPredicted RBP12.75□□□□□ -0.37
TMEM258-202ENST00000535042 BTN3A3O00478 584 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 DUX1O43812 170 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 TCEA3O75764 348 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 CPNE6O95741 557 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 ADRB1P08588 477 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 AMD1P17707 334 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 HSD17B3P37058 310 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 MSH2P43246 934 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 GFERP55789 205 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 IL2P60568 153 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 PPP1CAP62136 330 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 ILF2Q12905 390 aaKnown RBP12.75□□□□□ -0.37
TMEM258-202ENST00000535042 MAP9Q49MG5 647 aa12.75□□□□□ -0.37
TMEM258-202ENST00000535042 MROH9Q5TGP6 573 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms