RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 USP1O94782 785 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 GFPT2O94808 682 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 MT-CYBP00156 380 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 POLBP06746 335 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 CHRNB2P17787 502 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 MSX1P28360 303 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 MTIF2P46199 727 aaKnown RBP9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 CDH6P55285 790 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 FMO1Q01740 532 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 OGDHQ02218 1023 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 ALDH6A1Q02252 535 aaKnown RBP9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 HIBCHQ6NVY1 386 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 DCUN1D2Q6PH85 259 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 TMEM220Q6QAJ8 160 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 TTLL10Q6ZVT0 673 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 OVCH1Q7RTY7 1134 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 RAVER1Q8IY67 606 aaKnown RBP9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 ZZZ3Q8IYH5 903 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 METTL27Q8N6F8 245 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 C3orf20Q8ND61 904 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 PSMF1Q92530 271 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 DMRTA2Q96SC8 542 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 SPSB2Q99619 263 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 VKORC1Q9BQB6 163 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 PITPNM3Q9BZ71 974 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 CLEC4MQ9H2X3 399 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 XKR8Q9H6D3 395 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 GDPD2Q9HCC8 539 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 BPIFA1Q9NP55 256 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 KCNJ16Q9NPI9 418 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 KLHL1Q9NR64 748 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 SEPT11Q9NVA2 429 aaKnown RBP9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 CTSFQ9UBX1 484 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 NUP210LQ5VU65 1888 aa9.79□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 FAM237BA0A1B0GVD1 139 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 GTPBP10A4D1E9 387 aaKnown RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 ANKRD66B4E2M5 251 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 H3BMH7 237 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 PRRG2O14669 202 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 SMAD7O15105 426 aaKnown RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 WFS1O76024 890 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 TOXO94900 526 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 FGFR1OPO95684 399 aaKnown RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 TSPAN12O95859 305 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 HPP00738 406 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 HOXD4P09016 255 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 PRR35P0CG20 571 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 ACPPP15309 386 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 ITGAXP20702 1163 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 CA4P22748 312 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 SOX11P35716 441 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 SPAM1P38567 509 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 PPP1R2P41236 205 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 YBX1P67809 324 aaKnown RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 PPP2R2BQ00005 443 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 CDR2Q01850 454 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 TFF3Q07654 80 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 NIPAL4Q0D2K0 466 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 DPYSQ14117 519 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 ZIC1Q15915 447 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 ATP13A5Q4VNC0 1218 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 KRTCAP3Q53RY4 240 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 ZNF766Q5HY98 468 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 PPP1R15BQ5SWA1 713 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 FAM182AQ5T1J6 154 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 TMCO3Q6UWJ1 677 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 CHSY3Q70JA7 882 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 DET1Q7L5Y6 550 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 CCDC71Q8IV32 467 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 PHC2Q8IXK0 858 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 FMR1NBQ8N0W7 255 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 RASGEF1AQ8N9B8 481 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 C19orf47Q8N9M1 422 aaKnown RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 GOT1L1Q8NHS2 421 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 THAP3Q8WTV1 239 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 PHF10Q8WUB8 498 aaKnown RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 LRRN4Q8WUT4 740 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 VPS50Q96JG6 964 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 FERD3LQ96RJ6 166 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 PCDHB18PQ96TA0 734 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 MRM3Q9HC36 420 aaKnown RBP9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 STMN3Q9NZ72 180 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 COLEC10Q9Y6Z7 277 aa9.78□□□□□ -0.84
NEDD8-MDP1-202ENST00000534348 NSG1A0A0A6YYJ2 146 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 OR5H15A6NDH6 313 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 F8VZ95 297 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 MATN2O00339 956 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 MAP2K7O14733 419 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 GPR39O43194 453 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 KCNJ13O60928 360 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 CALB1P05937 261 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 HSP90AA1P07900 732 aaKnown RBP9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 SLC35G4P0C7Q5 338 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 MYBL2P10244 700 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 DESP17661 470 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 PSMA2P25787 234 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 NSG1P42857 185 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 OR1D4P47884 311 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 CACNG1Q06432 222 aa9.77□□□□□ -0.85
NEDD8-MDP1-202ENST00000534348 VWA3BQ502W6 1294 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms