RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 E7ESA3 106 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 RAP2AP10114 183 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 CMPK1P30085 196 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 ILF3Q12906 894 aaKnown RBP eCLIP17.24■□□□□ 0.352e-7■■□□□ 14.5
PHRF1-205ENST00000533464 B3GNT9Q6UX72 402 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 PRR23CQ6ZRP0 262 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 SLC2A13Q96QE2 648 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 SIRPGQ9P1W8 387 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 KDELR3O43731 214 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 GPR32O75388 356 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 DDI2Q5TDH0 399 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 HID1Q8IV36 788 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 SLC22A17Q8WUG5 538 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 TPK1Q9H3S4 243 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 NKX1-2Q9UD57 310 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-205ENST00000533464 A0A1W2PQ45 241 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-205ENST00000533464 A0A1W2PQY0 241 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 AQP12BA6NM10 295 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 DLDP09622 509 aaKnown RBP17.24■□□□□ 0.35
PHRF1-205ENST00000533464 HOXA11P31270 313 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-205ENST00000533464 DLG1Q12959 904 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 SIX1Q15475 284 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-205ENST00000533464 DPY19L1Q2PZI1 675 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 GPRIN1Q7Z2K8 1008 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 AQP12AQ8IXF9 295 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 CYB5D2Q8WUJ1 264 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 TSGA13Q96PP4 275 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 E7ENX8 843 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 LAMP2P13473 410 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 PTPN5P54829 565 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 RGS8P57771 180 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-205ENST00000533464 TOMM20Q15388 145 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 SNAPC1Q16533 368 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 RAB6CQ53S08 254 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 DCST1Q5T197 706 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 CNKSR3Q6P9H4 555 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 FAM220AQ7Z4H9 259 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 ARNTL2Q8WYA1 636 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 HERVK_113Q902F9 699 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 ZNF514Q96K75 400 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-205ENST00000533464 RAB6CQ9H0N0 254 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 CXorf21Q9HAI6 301 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 AKAP7Q9P0M2 348 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-205ENST00000533464 NR4A1P22736 598 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 GGT5P36269 586 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 CAPGP40121 348 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 DGKQP52824 942 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 CLDN10P78369 228 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 SNAP47Q5SQN1 464 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 IRAK1BP1Q5VVH5 260 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 C2CD4AQ8NCU7 369 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-205ENST00000533464 HERPUD2Q9BSE4 406 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 PCDHGB3Q9Y5G1 929 aa17.24■□□□□ 0.35
PHRF1-205ENST00000533464 ABHD14A-ACY1A0A1B0GW23 586 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 SAP18O00422 153 aaKnown RBP17.23■□□□□ 0.35
PHRF1-205ENST00000533464 EI24O14681 340 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 SLC25A12O75746 678 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 POU2F1P14859 743 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 NT5EP21589 574 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 JAK1P23458 1154 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 GDF5P43026 501 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 TEAD4Q15561 434 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 SVOPLQ8N434 492 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 WFIKKN2Q8TEU8 576 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 C1GALT1C1Q96EU7 318 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 C12orf66Q96MD2 445 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 LCHNA4D1U4 455 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 MATN2O00339 956 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 SCN2BO60939 215 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 CCNHP51946 323 aaPredicted RBP17.23■□□□□ 0.35
PHRF1-205ENST00000533464 SRP54P61011 504 aaKnown RBP17.23■□□□□ 0.35
PHRF1-205ENST00000533464 CREB5Q02930 508 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 TMEM130Q8N3G9 435 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 GIPC3Q8TF64 312 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 FCRL3Q96P31 734 aaPredicted RBP17.23■□□□□ 0.35
PHRF1-205ENST00000533464 NODALQ96S42 347 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 PAAF1Q9BRP4 392 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 SLC32A1Q9H598 525 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 TLL2Q9Y6L7 1015 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 PSMD11O00231 422 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 PAPSS2O95340 614 aaPredicted RBP17.23■□□□□ 0.35
PHRF1-205ENST00000533464 MZT2BQ6NZ67 158 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 HDDC2Q7Z4H3 204 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 NAT14Q8WUY8 206 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 LMLNQ96KR4 655 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 MIPEPQ99797 713 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 SLC22A14Q9Y267 594 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 NOBOXO60393 691 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 DNAJB1P25685 340 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 IL12RB1P42701 662 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 TAF13Q15543 124 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 MYLK3Q32MK0 819 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 FAM129CQ86XR2 697 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 GPR65Q8IYL9 337 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 C1orf74Q96LT6 269 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 FANCEQ9HB96 536 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 VPS29Q9UBQ0 182 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 DNAJB9Q9UBS3 223 aa17.23■□□□□ 0.35
PHRF1-205ENST00000533464 PCDH7O60245 1069 aa17.22■□□□□ 0.35
PHRF1-205ENST00000533464 WBP4O75554 376 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms