RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 ARL5AQ9Y689 179 aa6.92□□□□□ -1.3
ITGB1-218ENST00000528877 UBR5O95071 2799 aaPredicted RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 ASH1LQ9NR48 2969 aaKnown RBP6.92□□□□□ -1.3
ITGB1-218ENST00000528877 SDK2Q58EX2 2172 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 GOLGA6L3A6NEY3 463 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 PDZK1P1A8MUH7 402 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 F5H423 210 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-218ENST00000528877 FANCGO15287 622 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 LDB2O43679 373 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 SGTAO43765 313 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 KRT86O43790 486 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 FBXO24O75426 580 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 C1QL1O75973 258 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 SRP72O76094 671 aaKnown RBP6.91□□□□□ -1.3
ITGB1-218ENST00000528877 UBXN7O94888 489 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 AGTP01019 485 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 VIPP01282 170 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 GSTM1P09488 218 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 CCL4P13236 92 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 IDSP22304 550 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 CSTF2P33240 577 aaKnown RBP eCLIP6.91□□□□□ -1.3
ITGB1-218ENST00000528877 HADHAP40939 763 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 PRLHRP49683 370 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 GP2P55259 537 aaKnown RBP6.91□□□□□ -1.3
ITGB1-218ENST00000528877 RPS26P62854 115 aaKnown RBP6.91□□□□□ -1.3
ITGB1-218ENST00000528877 MC2RQ01718 297 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 GPR18Q14330 331 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 LONRF2Q1L5Z9 754 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 GPR33Q49SQ1 333 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF658BQ4V348 819 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-218ENST00000528877 CCDC81Q6ZN84 652 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 ARHGEF18Q6ZSZ5 1173 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 USP53Q70EK8 1073 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 AMZ2Q86W34 360 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF761Q86XN6 746 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-218ENST00000528877 JAMLQ86YT9 394 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 CARFQ8N187 725 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 NXPE1Q8N323 547 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 FAM71DQ8N9W8 422 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 OR4K2Q8NGD2 314 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 OR2L2Q8NH16 312 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 HEXDCQ8WVB3 486 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 ZFPM2Q8WW38 1151 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 AHCYL2Q96HN2 611 aaKnown RBP6.91□□□□□ -1.3
ITGB1-218ENST00000528877 C9orf72Q96LT7 481 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 FAM118BQ9BPY3 351 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 SPRY4Q9C004 299 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 SSU72Q9NP77 194 aaKnown RBP6.91□□□□□ -1.3
ITGB1-218ENST00000528877 FBXO8Q9NRD0 319 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 SEMA5BQ9P283 1151 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 WDR37Q9Y2I8 494 aa6.91□□□□□ -1.3
ITGB1-218ENST00000528877 COL6A6A6NMZ7 2263 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 C17orf113A0A1B0GUU1 675 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 TCRBV7S2A1N4TA0A589 114 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 MGAT4DA6NG13 374 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 MROH6A6NGR9 719 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 OR52A4PA6NMU1 304 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 PSMD3O43242 534 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 LIASO43766 372 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 UGT1A9O60656 530 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 SNX2O60749 519 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 SUN1O94901 812 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 METTL18O95568 372 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 MTHFD1P11586 935 aaKnown RBP6.9□□□□□ -1.3
ITGB1-218ENST00000528877 UGT1A6P19224 532 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 MSH3P20585 1137 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 ITGALP20701 1170 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 UGT1A1P22309 533 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 UGT1A4P22310 534 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 ACRV1P26436 265 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 AKT1P31749 480 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 STIP1P31948 543 aaKnown RBP6.9□□□□□ -1.3
ITGB1-218ENST00000528877 CA5AP35218 305 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 UGT1A3P35503 534 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 HALP42357 657 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 MAPK10P53779 464 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 ACVR1Q04771 509 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 OLIG2Q13516 323 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 SEMA5AQ13591 1074 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 NFE2L1Q14494 772 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 TGIF1Q15583 401 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 DCAF12Q5T6F0 453 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 SEL1L2Q5TEA6 688 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 ARHGAP40Q5TG30 622 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 MEI1Q5TIA1 1274 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 METRNLQ641Q3 311 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 DRICH1Q6PGQ1 229 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-218ENST00000528877 CEACAM20Q6UY09 585 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 PACS1Q6VY07 963 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 DNAJC14Q6Y2X3 702 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-218ENST00000528877 FAM83HQ6ZRV2 1179 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-218ENST00000528877 SNX20Q7Z614 316 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 LINC00523Q86TU6 105 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 TRIM48Q8IWZ4 208 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 SPC24Q8NBT2 197 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 OR13C4Q8NGS5 318 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 GPR150Q8NGU9 434 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 GDAP1Q8TB36 358 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 HM13Q8TCT9 377 aa6.9□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF398Q8TD17 642 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms