RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 SPACA3Q8IXA5 215 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 TBC1D21Q8IYX1 336 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 SLC22A15Q8IZD6 547 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 OR52E1Q8NGJ3 308 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 OR5AR1Q8NGP9 310 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 CFAP36Q96G28 342 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 FOPNLQ96NB1 174 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 DDA1Q9BW61 102 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 B3GNT4Q9C0J1 378 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 SOHLH2Q9NX45 425 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 FOXJ2Q9P0K8 574 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 ZC3H7BQ9UGR2 993 aaKnown RBP13.02□□□□□ -0.33
CAPN1-215ENST00000528396 SNX24Q9Y343 169 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 UTP11Q9Y3A2 253 aaKnown RBP13.02□□□□□ -0.33
CAPN1-215ENST00000528396 FAM169AQ9Y6X4 670 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 WDFY3Q8IZQ1 3526 aa13.02□□□□□ -0.33
CAPN1-215ENST00000528396 ZCWPW2A0A1B0GU75 182 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 TLCD2A6NGC4 264 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 BHMG1C9JSJ3 638 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-215ENST00000528396 STMND1H3BQB6 276 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 PKMP14618 531 aaKnown RBP13.01□□□□□ -0.33
CAPN1-215ENST00000528396 CDH3P22223 829 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 IVDP26440 423 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 SHMT2P34897 504 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 ATP1A2P50993 1020 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 UCNP55089 124 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 MRPS25P82663 173 aaKnown RBP13.01□□□□□ -0.33
CAPN1-215ENST00000528396 MC2RQ01718 297 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 ABRQ12979 859 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 CTBP1Q13363 440 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 TTLL9Q3SXZ7 439 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 HSP90AA5PQ58FG0 334 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 HP1BP3Q5SSJ5 553 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-215ENST00000528396 PLEKHS1Q5SXH7 462 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 TMTC4Q5T4D3 741 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 ANKS6Q68DC2 871 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 HIBCHQ6NVY1 386 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-215ENST00000528396 ZFAND4Q86XD8 727 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 DENND6AQ8IWF6 608 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 RAB42Q8N4Z0 105 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 SIDT2Q8NBJ9 832 aaKnown RBP13.01□□□□□ -0.33
CAPN1-215ENST00000528396 OR5K2Q8NHB8 316 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 LKAAEAR1Q8TD35 194 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 FAM136AQ96C01 138 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 LRRC39Q96DD0 335 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 CTRCQ99895 268 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 ERP44Q9BS26 406 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 ZPBPQ9BS86 351 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 RAB17Q9H0T7 212 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 DPH5Q9H2P9 285 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 ZNF768Q9H5H4 540 aaKnown RBP13.01□□□□□ -0.33
CAPN1-215ENST00000528396 TFB2MQ9H5Q4 396 aaKnown RBP13.01□□□□□ -0.33
CAPN1-215ENST00000528396 XKR8Q9H6D3 395 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 FBXO8Q9NRD0 319 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 FBXO6Q9NRD1 293 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-215ENST00000528396 IARS2Q9NSE4 1012 aaKnown RBP13.01□□□□□ -0.33
CAPN1-215ENST00000528396 TSR3Q9UJK0 312 aaKnown RBP13.01□□□□□ -0.33
CAPN1-215ENST00000528396 CHMP2BQ9UQN3 213 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 PCDHGA3Q9Y5H0 932 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 MRFAP1Q9Y605 127 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 FAM208BQ5VWN6 2430 aa13.01□□□□□ -0.33
CAPN1-215ENST00000528396 C2orf74A8MZ97 194 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 C9orf172C9J069 976 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 KIF2AO00139 706 aaPredicted RBP13□□□□□ -0.33
CAPN1-215ENST00000528396 NIPSNAP2O75323 286 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 BANF1O75531 89 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 LIPCP11150 499 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 ITPKBP27987 946 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 ACADLP28330 430 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 ELK3P41970 407 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 SLC1A2P43004 574 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 ADARP55265 1226 aaKnown RBP13□□□□□ -0.33
CAPN1-215ENST00000528396 TMPRSS3P57727 454 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 PPP1CAP62136 330 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 TLE3Q04726 772 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 COL28A1Q2UY09 1125 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 MSS51Q4VC12 460 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 CTSL3PQ5NE16 218 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 UNC5DQ6UXZ4 953 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 CENPUQ71F23 418 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 RASGRP3Q8IV61 690 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 DCUN1D3Q8IWE4 304 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 ZBTB2Q8N680 514 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 BIRC8Q96P09 236 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 OR6C1Q96RD1 312 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 MAP3K3Q99759 626 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 PDE7BQ9NP56 450 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 FBXO5Q9UKT4 447 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 ACSL6Q9UKU0 697 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 SLC39A10Q9ULF5 831 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 LHX6Q9UPM6 363 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 B3GALT1Q9Y5Z6 326 aa13□□□□□ -0.33
CAPN1-215ENST00000528396 IGHV5-51A0A0C4DH38 117 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 PIPSLA2A3N6 862 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 RAD51CO43502 376 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 GPC4O75487 556 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 SLCO2B1O94956 709 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 ZBTB11O95625 1053 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-215ENST00000528396 S1PR4O95977 384 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 TUBB4AP04350 444 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms