RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SLC13A5Q86YT5 568 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-212ENST00000527887 TBC1D21Q8IYX1 336 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 CLDN19Q8N6F1 224 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 OR52E1Q8NGJ3 308 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 OR52K1Q8NGK4 314 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 NAT14Q8WUY8 206 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 ETNK1Q9HBU6 452 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 PAK5Q9P286 719 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 ZNF148Q9UQR1 794 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 JRKLQ9Y4A0 524 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 GSAPA4D1B5 854 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 CTAGE9A4FU28 777 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 SLC9B1P1A6NJY1 282 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 AP3B1O00203 1094 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 RFPL1O75677 317 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 HBQ1P09105 142 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 PDHA2P29803 388 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 FOXN2P32314 431 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 SHMT2P34897 504 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 PREPP48147 710 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 PMS2P54278 862 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 ACVR1Q04771 509 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 SEMA5AQ13591 1074 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 UGT8Q16880 541 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 ATP1A1-AS1Q5TC04 95 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 AFTPHQ6ULP2 937 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 PPP1R21Q6ZMI0 780 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 HOOK3Q86VS8 718 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 PTRH1Q86Y79 214 aaKnown RBP13.77□□□□□ -0.21
CAPN1-212ENST00000527887 PHC3Q8NDX5 983 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 DPH2Q9BQC3 489 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-212ENST00000527887 TSSK1BQ9BXA7 367 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 CHRNA10Q9GZZ6 450 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 ACTL8Q9H568 366 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 L2HGDHQ9H9P8 463 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 OR6C2Q9NZP2 312 aa13.77□□□□□ -0.21
CAPN1-212ENST00000527887 CCDC162PA2VCL2 907 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 CDC14CA4D256 554 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 MEN1O00255 615 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 BTN3A3O00478 584 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 BTN3A1O00481 513 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 IFNB1P01574 187 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 FURINP09958 794 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 ACADLP28330 430 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 TLE1Q04724 770 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 KLRB1Q12918 225 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 RPS6KA1Q15418 735 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 GPR19Q15760 415 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 CCNG2Q16589 344 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 AARS2Q5JTZ9 985 aaKnown RBP13.76□□□□□ -0.21
CAPN1-212ENST00000527887 TSTD2Q5T7W7 516 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 PAPD7Q5XG87 772 aaKnown RBP13.76□□□□□ -0.21
CAPN1-212ENST00000527887 DRICH1Q6PGQ1 229 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-212ENST00000527887 ADGRF3Q8IZF5 1079 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 CCDC89Q8N998 374 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 OR13J1Q8NGT2 312 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 OR4L1Q8NH43 312 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 MAIP1Q8WWC4 291 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 ATG4AQ8WYN0 398 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 ELMO1Q92556 727 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 MR1Q95460 341 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 HDAC10Q969S8 669 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 TRAPPC9Q96Q05 1148 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 NAPGQ99747 312 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-212ENST00000527887 C17orf62Q9BQA9 187 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 CASS4Q9NQ75 786 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 ZNF71Q9NQZ8 489 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-212ENST00000527887 RAB6BQ9NRW1 208 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 ACTR10Q9NZ32 417 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 ASF1AQ9Y294 204 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 MAN2B2Q9Y2E5 1009 aa13.76□□□□□ -0.21
CAPN1-212ENST00000527887 ZNF106Q9H2Y7 1883 aaKnown RBP13.76□□□□□ -0.21
CAPN1-212ENST00000527887 A0A0U1RQJ8 604 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 SLC5A10A0PJK1 596 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 PRSS56P0CW18 603 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 ST6GAL1P15907 406 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 CYP2A7P20853 494 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 ARCN1P48444 511 aaKnown RBP13.75□□□□□ -0.21
CAPN1-212ENST00000527887 PRAMEP78395 509 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 PRKG2Q13237 762 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 SYTL3Q4VX76 610 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 DNAJC21Q5F1R6 531 aaKnown RBP13.75□□□□□ -0.21
CAPN1-212ENST00000527887 PLEKHS1Q5SXH7 462 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 MEI1Q5TIA1 1274 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 DSELQ8IZU8 1212 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 OR5K2Q8NHB8 316 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 CLIP3Q96DZ5 547 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 TCTN2Q96GX1 697 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 PPM1MQ96MI6 270 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 TLR10Q9BXR5 811 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 NLNQ9BYT8 704 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 TRIM4Q9C037 500 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 AKIRIN1Q9H9L7 192 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-212ENST00000527887 PIH1D1Q9NWS0 290 aaKnown RBP13.75□□□□□ -0.21
CAPN1-212ENST00000527887 ANAPC5Q9UJX4 755 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 DRG1Q9Y295 367 aaKnown RBP13.75□□□□□ -0.21
CAPN1-212ENST00000527887 AP1M2Q9Y6Q5 423 aa13.75□□□□□ -0.21
CAPN1-212ENST00000527887 CCDC78A2IDD5 438 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 TMEM150CB9EJG8 249 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 E7EQ34 232 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms