RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 H7C0S8 307 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 TMEM63AO94886 807 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 ATXN8OSP0DMR3 200 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 AGXTP21549 392 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 ITGA1P56199 1179 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 LAMB3Q13751 1172 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 PTCHD3Q3KNS1 767 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 FAM69BQ5VUD6 431 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 KCTD11Q693B1 232 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 SYTL1Q8IYJ3 562 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 GPR135Q8IZ08 494 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 ACRBPQ8NEB7 543 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 PCMTD2Q9NV79 361 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 ASF1AQ9Y294 204 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 REXO2Q9Y3B8 237 aaKnown RBP21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 PCDHGA9Q9Y5G4 932 aaKnown RBP21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 MAST4O15021 2626 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 A6NL46 340 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 ZNF185O15231 689 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 ZNF749O43361 778 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 AP2A2O94973 939 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 HBQ1P09105 142 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 GSTM1P09488 218 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 RORAP35398 523 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 CD97P48960 835 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 ZNF75DP51815 510 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 VAV2P52735 878 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 GSTM4Q03013 218 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 BOP1Q14137 746 aaKnown RBP21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 DBN1Q16643 649 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 P3H1Q32P28 736 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 NADK2Q4G0N4 442 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 RAD9BQ6WBX8 426 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 PIANPQ8IYJ0 282 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 ADGRF3Q8IZF5 1079 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 LRRC57Q8N9N7 239 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 CPT1CQ8TCG5 803 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 ELMO1Q92556 727 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 TMEM121Q9BTD3 319 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 PITPNM3Q9BZ71 974 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 PACSIN2Q9UNF0 486 aaPredicted RBP21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 TDRKHQ9Y2W6 561 aaKnown RBP21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 ZNF451Q9Y4E5 1061 aa21.68■■□□□ 1.06
TRAPPC4-208ENST00000527680 C9J4A7 227 aa21.67■■□□□ 1.06
TRAPPC4-208ENST00000527680 LIN7AO14910 233 aaPredicted RBP21.67■■□□□ 1.06
TRAPPC4-208ENST00000527680 GAS8O95995 478 aa21.67■■□□□ 1.06
TRAPPC4-208ENST00000527680 NSG1P42857 185 aa21.67■■□□□ 1.06
TRAPPC4-208ENST00000527680 KLHDC8BQ8IXV7 354 aa21.67■■□□□ 1.06
TRAPPC4-208ENST00000527680 SYCE1Q8N0S2 351 aa21.67■■□□□ 1.06
TRAPPC4-208ENST00000527680 DNAAF3Q8N9W5 541 aa21.67■■□□□ 1.06
TRAPPC4-208ENST00000527680 OR5AR1Q8NGP9 310 aa21.67■■□□□ 1.06
TRAPPC4-208ENST00000527680 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.67■■□□□ 1.06
TRAPPC4-208ENST00000527680 RP1L1Q8IWN7 2480 aaPredicted RBP21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 QSOX1O00391 747 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 FTH1P02794 183 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 MSL3P1P0C860 447 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 MSNP26038 577 aaKnown RBP21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 ZNF658BQ4V348 819 aaPredicted RBP21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 SYTL3Q4VX76 610 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 MLIPQ5VWP3 458 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 SPESP1Q6UW49 350 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 UNC5AQ6ZN44 842 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 CDHR3Q6ZTQ4 885 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 LINC00523Q86TU6 105 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 ADAMTS17Q8TE56 1095 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 MRFAP1L1Q96HT8 127 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 DPH2Q9BQC3 489 aaPredicted RBP21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 LRRC4CQ9HCJ2 640 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 POLG2Q9UHN1 485 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 ICKQ9UPZ9 632 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 PRSS21Q9Y6M0 314 aa21.66■■□□□ 1.06
TRAPPC4-208ENST00000527680 RELNP78509 3460 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 CLEC18AA5D8T8 446 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 MIF4GDA9UHW6 222 aaKnown RBP21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 AP2A1O95782 977 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 GP1BBP13224 206 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 SHMT2P34897 504 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 RRADP55042 308 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 GDF10P55107 478 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 KIF5AQ12840 1032 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 CCDC38Q502W7 563 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 ZNF789Q5FWF6 425 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 CLEC18BQ6UXF7 455 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 NAPRTQ6XQN6 538 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 MED25Q71SY5 747 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 TRIM73Q86UV7 250 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 TMEM102Q8N9M5 508 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 CLEC18CQ8NCF0 446 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 FDCSPQ8NFU4 85 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 TCTN2Q96GX1 697 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 TTC1Q99614 292 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 MFRPQ9BY79 579 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 MLXIPLQ9NP71 852 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 IRAK4Q9NWZ3 460 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 MAP10Q9P2G4 905 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 GPN3Q9UHW5 284 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 PADI2Q9Y2J8 665 aa21.65■■□□□ 1.06
TRAPPC4-208ENST00000527680 OR51F1A6NGY5 319 aa21.64■■□□□ 1.05
TRAPPC4-208ENST00000527680 DPM1O60762 260 aa21.64■■□□□ 1.05
TRAPPC4-208ENST00000527680 OR2B3O76000 313 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms