RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 KCTD5Q9NXV2 234 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 TMPRSS11EQ9UL52 423 aa17.21■□□□□ 0.35
USH1C-205ENST00000527020 EIF3LQ9Y262 564 aaKnown RBP17.21■□□□□ 0.35
USH1C-205ENST00000527020 A0A1W2PRU2 124 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 UPK1AO00322 258 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 ULK1O75385 1050 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 CLIC3O95833 236 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 EPB42P16452 691 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 GGT1P19440 569 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 PCSK6P29122 969 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 SLC5A2P31639 672 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 SNRPD1P62314 119 aaKnown RBP17.21■□□□□ 0.34
USH1C-205ENST00000527020 CRY1Q16526 586 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 FAM174BQ3ZCQ3 159 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 CYBRD1Q53TN4 286 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 SGO1Q5FBB7 561 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 ASTLQ6HA08 431 aaPredicted RBP17.21■□□□□ 0.34
USH1C-205ENST00000527020 KRTCAP2Q8N6L1 136 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 RNF145Q96MT1 663 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 SLC46A2Q9BY10 475 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 SUV39H2Q9H5I1 410 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 IKZF5Q9H5V7 419 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 ASIC5Q9NY37 505 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 PCDH10Q9P2E7 1040 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 HS3ST2Q9Y278 367 aa17.21■□□□□ 0.34
USH1C-205ENST00000527020 IGLV3-16A0A075B6K0 115 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 BNIP3LO60238 219 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 STK16O75716 305 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 KCNH1O95259 989 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 BMP10O95393 424 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 CBSLP0DN79 551 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 CBSP35520 551 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 GNPDA1P46926 289 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 ARHGEF7Q14155 803 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 ARHGEF6Q15052 776 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 TTLL9Q3SXZ7 439 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 SPANXN4Q5MJ08 99 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 GALNT13Q8IUC8 556 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 OSCP1Q8WVF1 389 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 CARS2Q9HA77 564 aaKnown RBP17.2■□□□□ 0.34
USH1C-205ENST00000527020 LRTM1Q9HBL6 345 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 SMPD3Q9NY59 655 aaPredicted RBP17.2■□□□□ 0.34
USH1C-205ENST00000527020 SLC25A37Q9NYZ2 338 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 PDE10AQ9Y233 779 aa17.2■□□□□ 0.34
USH1C-205ENST00000527020 TRAV19A0A0A6YYK7 116 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 C1SP09871 688 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 RPS9P46781 194 aaKnown RBP17.19■□□□□ 0.34
USH1C-205ENST00000527020 MAD2L1Q13257 205 aaPredicted RBP17.19■□□□□ 0.34
USH1C-205ENST00000527020 GBX1Q14549 363 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 USP39Q53GS9 565 aaKnown RBP17.19■□□□□ 0.34
USH1C-205ENST00000527020 CYGBQ8WWM9 190 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 CCDC115Q96NT0 180 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 COPS8Q99627 209 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 RNF208Q9H0X6 261 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 ZBP1Q9H171 429 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 CLMPQ9H6B4 373 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.19■□□□□ 0.34
USH1C-205ENST00000527020 ZNHIT2Q9UHR6 403 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 AREL1O15033 823 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 SEC22BO75396 215 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 PRSS23O95084 383 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 SNAP29O95721 258 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 ANXA6P08133 673 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 RPIAP49247 311 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 SH3BGRP55822 239 aaPredicted RBP17.19■□□□□ 0.34
USH1C-205ENST00000527020 C11orf91Q3C1V1 193 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 LRRC73Q5JTD7 316 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 USP45Q70EL2 814 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 ZNF786Q8N393 782 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 FAM86B1Q8N7N1 296 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 MAGEE2Q8TD90 523 aaPredicted RBP17.19■□□□□ 0.34
USH1C-205ENST00000527020 ASIC4Q96FT7 647 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 VPS50Q96JG6 964 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 ZBTB18Q99592 522 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 SLC29A3Q9BZD2 475 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 ACPTQ9BZG2 426 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 DPY30Q9C005 99 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 SOX17Q9H6I2 414 aaPredicted RBP17.19■□□□□ 0.34
USH1C-205ENST00000527020 CD320Q9NPF0 282 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 KLHL42Q9P2K6 505 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 CCL26Q9Y258 94 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 FADS3Q9Y5Q0 445 aa17.19■□□□□ 0.34
USH1C-205ENST00000527020 CXorf51AA0A1B0GTR3 108 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 A0A1B0GVG6 124 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 ABHD14A-ACY1A0A1B0GW23 586 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 H0Y858 1186 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 CLOCKO15516 846 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 PGRP06401 933 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 ANXA5P08758 320 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 CCL5P13501 91 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 AOAHP28039 575 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 GGT5P36269 586 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 CAPGP40121 348 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 SLC44A4Q53GD3 710 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 LILRA6Q6PI73 481 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 TTC33Q6PID6 262 aaPredicted RBP17.18■□□□□ 0.34
USH1C-205ENST00000527020 DPY19L3Q6ZPD9 716 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 USP51Q70EK9 711 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 ALDH16A1Q8IZ83 802 aa17.18■□□□□ 0.34
USH1C-205ENST00000527020 OFCC1Q8IZS5 231 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms