RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CBSP35520 551 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 GP5P40197 560 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 GRTP1Q5TC63 336 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 WDR93Q6P2C0 686 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 WDR74Q6RFH5 385 aaPredicted RBP12.59□□□□□ -0.39
SMPD1-202ENST00000526280 UNC5DQ6UXZ4 953 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 NEK10Q6ZWH5 1172 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 TRMT10CQ7L0Y3 403 aaKnown RBP12.59□□□□□ -0.39
SMPD1-202ENST00000526280 TMPRSS9Q7Z410 1059 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 PIM3Q86V86 326 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 SPNS2Q8IVW8 549 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 GSPT2Q8IYD1 628 aaKnown RBP12.59□□□□□ -0.39
SMPD1-202ENST00000526280 ACVR1CQ8NER5 493 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 OR5AR1Q8NGP9 310 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 ATXN7L3BQ96GX2 97 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 VPS39Q96JC1 886 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 ELMO2Q96JJ3 720 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 CYTH2Q99418 400 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 OLFM1Q99784 485 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 DPYSL5Q9BPU6 564 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 NUDT22Q9BRQ3 303 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 TRIT1Q9H3H1 467 aaKnown RBP12.59□□□□□ -0.39
SMPD1-202ENST00000526280 TFB2MQ9H5Q4 396 aaKnown RBP12.59□□□□□ -0.39
SMPD1-202ENST00000526280 ACSS3Q9H6R3 686 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 RDH14Q9HBH5 336 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 POLG2Q9UHN1 485 aa12.59□□□□□ -0.39
SMPD1-202ENST00000526280 TRMT6Q9UJA5 497 aaKnown RBP12.59□□□□□ -0.39
SMPD1-202ENST00000526280 FAM95CA0A1B0GW59 222 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 FAM149AA5PLN7 773 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 EIF3FO00303 357 aaPredicted RBP12.58□□□□□ -0.4
SMPD1-202ENST00000526280 FAM155BO75949 473 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 PROS1P07225 676 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 ENO3P13929 434 aaPredicted RBP12.58□□□□□ -0.4
SMPD1-202ENST00000526280 HOXB3P14651 431 aaPredicted RBP12.58□□□□□ -0.4
SMPD1-202ENST00000526280 TYRP1P17643 537 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 AMD1P17707 334 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 MCM3P25205 808 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 CSF2RBP32927 897 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 MAPK9P45984 424 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 PDX1P52945 283 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 PMS2P54278 862 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 TAS2R39P59534 338 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 ZFP36L1Q07352 338 aaKnown RBP12.58□□□□□ -0.4
SMPD1-202ENST00000526280 PRKG2Q13237 762 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 EFTUD2Q15029 972 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMPD1-202ENST00000526280 PLCL1Q15111 1095 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 ISXQ2M1V0 245 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 KLHL38Q2WGJ6 581 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 MAP9Q49MG5 647 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 PAQR3Q6TCH7 311 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 CYHR1Q6ZMK1 362 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 ZNF574Q6ZN55 896 aaPredicted RBP12.58□□□□□ -0.4
SMPD1-202ENST00000526280 CPNE9Q8IYJ1 553 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 OR4D9Q8NGE8 314 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 CFAP61Q8NHU2 1237 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 SKA2Q8WVK7 121 aaPredicted RBP12.58□□□□□ -0.4
SMPD1-202ENST00000526280 JPH3Q8WXH2 748 aaPredicted RBP12.58□□□□□ -0.4
SMPD1-202ENST00000526280 NCSTNQ92542 709 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 DEPDC7Q96QD5 511 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 RBBP8Q99708 897 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 HGH1Q9BTY7 390 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 SCNM1Q9BWG6 230 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 RUVBL2Q9Y230 463 aaKnown RBP12.58□□□□□ -0.4
SMPD1-202ENST00000526280 MTO1Q9Y2Z2 717 aaKnown RBP12.58□□□□□ -0.4
SMPD1-202ENST00000526280 NFS1Q9Y697 457 aa12.58□□□□□ -0.4
SMPD1-202ENST00000526280 A0A087WUV0 522 aaPredicted RBP12.57□□□□□ -0.4
SMPD1-202ENST00000526280 CSO75390 466 aaKnown RBP12.57□□□□□ -0.4
SMPD1-202ENST00000526280 C1orf105O95561 183 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 RPN2P04844 631 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 ABHD2P08910 425 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 TPBGLP0DKB5 382 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 MPC1LP0DKB6 136 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 SPRP35270 261 aaPredicted RBP12.57□□□□□ -0.4
SMPD1-202ENST00000526280 PGGT1BP53609 377 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 LIMK2P53671 638 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 VSNL1P62760 191 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 POU4F1Q01851 419 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 TARDBPQ13148 414 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMPD1-202ENST00000526280 PDAP1Q13442 181 aaKnown RBP12.57□□□□□ -0.4
SMPD1-202ENST00000526280 BEND6Q5SZJ8 279 aaPredicted RBP12.57□□□□□ -0.4
SMPD1-202ENST00000526280 TMEM71Q6P5X7 295 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 KLHL35Q6PF15 583 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 B3GNT8Q7Z7M8 397 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 MARCH9Q86YJ5 346 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 RASGRP3Q8IV61 690 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 SLITRK4Q8IW52 837 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 DCUN1D3Q8IWE4 304 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 OR4E2Q8NGC2 313 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 OR52E1Q8NGJ3 308 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 EEF1AKMT1Q8WVE0 214 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 LCN9Q8WX39 176 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 ASB11Q8WXH4 323 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 RSC1A1Q92681 617 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 GRAMD1AQ96CP6 724 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 FOPNLQ96NB1 174 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 TMEM74Q96NL1 305 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 GPR22Q99680 433 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 RAB33BQ9H082 229 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 SEMA6CQ9H3T2 930 aa12.57□□□□□ -0.4
SMPD1-202ENST00000526280 PDP2Q9P2J9 529 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms