RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 NEK10Q6ZWH5 1172 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 USP30Q70CQ3 517 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 DPPA4Q7L190 304 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 DSG4Q86SJ6 1040 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 TBC1D3Q8IZP1 549 aaPredicted RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 ZNF781Q8N8C0 355 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 DEFB124Q8NES8 71 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 OR2T34Q8NGX1 318 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 CEP76Q8TAP6 659 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 UBTD2Q8WUN7 234 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ANKRD49Q8WVL7 239 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 DNASE2BQ8WZ79 361 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 SLC7A6OSQ96CW6 309 aaPredicted RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 EID2BQ96D98 161 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 PPP1R16AQ96I34 528 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 MAGEB10Q96LZ2 347 aaPredicted RBP6.95□□□□□ -1.3
VPS11-201ENST00000524454 RILPQ96NA2 401 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 CAMK1GQ96NX5 476 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 VPS35Q96QK1 796 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 BTBD10Q9BSF8 475 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ZSCAN5AQ9BUG6 496 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 CCDC106Q9BWC9 280 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 NMUR2Q9GZQ4 415 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ZMYND15Q9H091 742 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 GSTO2Q9H4Y5 243 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 COG4Q9H9E3 785 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 MEAF6Q9HAF1 191 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 RDH14Q9HBH5 336 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 SGK2Q9HBY8 427 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 SLC40A1Q9NP59 571 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 FZD3Q9NPG1 666 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 IL26Q9NPH9 171 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ATP13A2Q9NQ11 1180 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.95□□□□□ -1.3
VPS11-201ENST00000524454 ZDHHC3Q9NYG2 299 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 NUDT4Q9NZJ9 180 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 IL36AQ9UHA7 158 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 TAGLN3Q9UI15 199 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 FZD4Q9ULV1 537 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 CDYLQ9Y232 598 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 ITM2BQ9Y287 266 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 CRYL1Q9Y2S2 319 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 SNX11Q9Y5W9 270 aa6.95□□□□□ -1.3
VPS11-201ENST00000524454 CEP250Q9BV73 2442 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 NPIPB15A6NHN6 443 aaPredicted RBP6.94□□□□□ -1.3
VPS11-201ENST00000524454 LRRC72A6NJI9 287 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 C1QTNF3-AMACRE9PGA6 284 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 SLC16A5O15375 505 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 PLRG1O43660 514 aaKnown RBP6.94□□□□□ -1.3
VPS11-201ENST00000524454 ZBTB14O43829 449 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 FOXD2O60548 495 aaPredicted RBP6.94□□□□□ -1.3
VPS11-201ENST00000524454 LILRA1O75019 489 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 LYPLA1O75608 230 aaPredicted RBP6.94□□□□□ -1.3
VPS11-201ENST00000524454 KCNK5O95279 499 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 PIGNO95427 931 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 WNT1P04628 370 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 RPS17P08708 135 aaKnown RBP6.94□□□□□ -1.3
VPS11-201ENST00000524454 MTHFD2P13995 350 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 GNSP15586 552 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 ITGB7P26010 798 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 HOXD12P35452 270 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 MMP12P39900 470 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 GLRBP48167 497 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 SPINT3P49223 89 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 ACADVLP49748 655 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 NOVA1P51513 510 aaKnown RBP6.94□□□□□ -1.3
VPS11-201ENST00000524454 PKNOX1P55347 436 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 ELF3P78545 371 aaPredicted RBP6.94□□□□□ -1.3
VPS11-201ENST00000524454 CDKL1Q00532 357 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 ARHGEF7Q14155 803 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 GBX1Q14549 363 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 ZNF460Q14592 562 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 MAPRE2Q15555 327 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 KIF19Q2TAC6 998 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 SMU1Q2TAY7 513 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 CTSL3PQ5NE16 218 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 WASHC2DQ5SRD0 308 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 FAM46CQ5VWP2 391 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 LRRC66Q68CR7 880 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 ERAP2Q6P179 960 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 TMEM207Q6UWW9 146 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 CHSY3Q70JA7 882 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 MAVSQ7Z434 540 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 SERPINA9Q86WD7 417 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 C10orf67Q8IYJ2 551 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 LSMEM2Q8N112 164 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 TCAIMQ8N3R3 496 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 TRAM1L1Q8N609 369 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 MEIOBQ8N635 442 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 PDPRQ8NCN5 879 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 DDHD1Q8NEL9 900 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 CEP70Q8NHQ1 597 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 C1orf216Q8TAB5 229 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 FUBP1Q96AE4 644 aaKnown RBP6.94□□□□□ -1.3
VPS11-201ENST00000524454 RAB7BQ96AH8 199 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 PTERQ96BW5 349 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 COPS8Q99627 209 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 GPR21Q99679 349 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 ALG2Q9H553 416 aa6.94□□□□□ -1.3
VPS11-201ENST00000524454 ZNF385DQ9H6B1 395 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms