RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PCNX1Q96RV3 2341 aa11.23□□□□□ -0.61
SDCBP-211ENST00000523441 C2orf74A8MZ97 194 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 MYO1FO00160 1098 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 ZSCAN9O15535 394 aaPredicted RBP11.22□□□□□ -0.61
SDCBP-211ENST00000523441 KLHL18O94889 574 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 TNNT3P45378 269 aaPredicted RBP11.22□□□□□ -0.61
SDCBP-211ENST00000523441 TAS2R40P59535 323 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 IFI35P80217 286 aaPredicted RBP11.22□□□□□ -0.61
SDCBP-211ENST00000523441 PPIDQ08752 370 aaKnown RBP11.22□□□□□ -0.61
SDCBP-211ENST00000523441 NFKBIBQ15653 356 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 ZIC1Q15915 447 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 RBBP7Q16576 425 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 ZNF630Q2M218 657 aaPredicted RBP11.22□□□□□ -0.61
SDCBP-211ENST00000523441 CT47A1Q5JQC4 288 aaPredicted RBP11.22□□□□□ -0.61
SDCBP-211ENST00000523441 SIRPB2Q5JXA9 342 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 TTLL10Q6ZVT0 673 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 MICALCLQ6ZW33 695 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 AMIGO1Q86WK6 493 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 FAM20CQ8IXL6 584 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 ZNF295-AS1Q8N0V1 137 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 CARFQ8N187 725 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 DDHD1Q8NEL9 900 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 OR2L2Q8NH16 312 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.22□□□□□ -0.61
SDCBP-211ENST00000523441 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.22□□□□□ -0.61
SDCBP-211ENST00000523441 RELTQ969Z4 430 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 ZNF670Q9BS34 389 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 NDC1Q9BTX1 674 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 LHPPQ9H008 270 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 SLC25A51Q9H1U9 297 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 FAM96AQ9H5X1 160 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 KLHL20Q9Y2M5 609 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 NEU2Q9Y3R4 380 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 PKP3Q9Y446 797 aa11.22□□□□□ -0.61
SDCBP-211ENST00000523441 DNMT3AQ9Y6K1 912 aaPredicted RBP11.22□□□□□ -0.61
SDCBP-211ENST00000523441 MATN2O00339 956 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 SOCS6O14544 535 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 PRAMEF1O95521 474 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 ESRRAP11474 423 aaPredicted RBP11.21□□□□□ -0.61
SDCBP-211ENST00000523441 HMGCLP35914 325 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 Q0VFX4 171 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 ITGA9Q13797 1035 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 TUBB8Q3ZCM7 444 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 B3GNTL1Q67FW5 361 aaPredicted RBP11.21□□□□□ -0.61
SDCBP-211ENST00000523441 RHBDD2Q6NTF9 364 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 MRPL14Q6P1L8 145 aaKnown RBP11.21□□□□□ -0.61
SDCBP-211ENST00000523441 SPESP1Q6UW49 350 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 ISLR2Q6UXK2 745 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 CEP97Q8IW35 865 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 MAP7D3Q8IWC1 876 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 ZNF808Q8N4W9 903 aaPredicted RBP11.21□□□□□ -0.61
SDCBP-211ENST00000523441 NIPA2Q8N8Q9 360 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 IPMKQ8NFU5 416 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 FAM71BQ8TC56 605 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 ZNF398Q8TD17 642 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 ZFPM2Q8WW38 1151 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 FATE1Q969F0 183 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 DCUN1D1Q96GG9 259 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 TAAR6Q96RI8 345 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 PITPNM3Q9BZ71 974 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.21□□□□□ -0.61
SDCBP-211ENST00000523441 ISCUQ9H1K1 167 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 ASB8Q9H765 288 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 GLOD4Q9HC38 313 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 ZNF160Q9HCG1 818 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 PTGFRNQ9P2B2 879 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 PLAGL1Q9UM63 463 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 TDRKHQ9Y2W6 561 aaKnown RBP11.21□□□□□ -0.61
SDCBP-211ENST00000523441 HEBP2Q9Y5Z4 205 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 AP1M2Q9Y6Q5 423 aa11.21□□□□□ -0.61
SDCBP-211ENST00000523441 NAV3Q8IVL0 2385 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 A0A0A6YYK5 440 aaPredicted RBP11.2□□□□□ -0.62
SDCBP-211ENST00000523441 LRRD1A4D1F6 860 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 IFRD1O00458 451 aaPredicted RBP11.2□□□□□ -0.62
SDCBP-211ENST00000523441 GAPDHSO14556 408 aaPredicted RBP11.2□□□□□ -0.62
SDCBP-211ENST00000523441 STX7O15400 261 aaKnown RBP11.2□□□□□ -0.62
SDCBP-211ENST00000523441 TNNT1P13805 278 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 UGT2B7P16662 529 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 NFKB1P19838 968 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 PDHA2P29803 388 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 TDGF1P3P51864 188 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 WNT3AP56704 352 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 SOX8P57073 446 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 PMP22Q01453 160 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 MYL5Q02045 173 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 BRD3Q15059 726 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 PDK2Q15119 407 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 FAAH2Q6GMR7 532 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 KIRREL2Q6UWL6 708 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 NCCRP1Q6ZVX7 275 aaPredicted RBP11.2□□□□□ -0.62
SDCBP-211ENST00000523441 ADGRF3Q8IZF5 1079 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 DTWD1Q8N5C7 304 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 SIRT6Q8N6T7 355 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 PROKR1Q8TCW9 393 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 RAPGEF5Q92565 580 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 NR4A3Q92570 626 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 C8orf44Q96CB5 159 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 RNF157Q96PX1 679 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 SLC22A11Q9NSA0 550 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 SPHK1Q9NYA1 384 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms