RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TNFRSF8P28908 595 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 TLX1P31314 330 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-216ENST00000523088 LTBRP36941 435 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 RABIFP47224 123 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 SLC1A6P48664 564 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 SLC11A1P49279 550 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 RARRES1P49788 294 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF81P51508 661 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 TPMTP51580 245 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 CEBPGP53567 150 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 RAD23AP54725 363 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 EIF3BP55884 814 aaKnown RBP7.4□□□□□ -1.22
HDAC3-216ENST00000523088 PRPS1P60891 318 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 ARF3P61204 181 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-216ENST00000523088 ARF1P84077 181 aaKnown RBP7.4□□□□□ -1.22
HDAC3-216ENST00000523088 NRG1Q02297 640 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-216ENST00000523088 TYRO3Q06418 890 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 SLC3A1Q07837 685 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 DSC1Q08554 894 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 LAMTOR4Q0VGL1 99 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 MAP4K2Q12851 820 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 FGL2Q14314 439 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 KCNJ12Q14500 433 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 MFSD13AQ14CX5 517 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 OXA1LQ15070 435 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 GXYLT1Q4G148 440 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 CLLU1OSQ5K130 101 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 FAM26FQ5R3K3 315 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 LDLRAP1Q5SW96 308 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 CES5AQ6NT32 575 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 CDC73Q6P1J9 531 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 RFWD3Q6PCD5 774 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 KLHDC10Q6PID8 442 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 NPSR1Q6W5P4 371 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 COLCA1Q6ZS62 124 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 PIGWQ7Z7B1 504 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 GPR65Q8IYL9 337 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 MCOLN2Q8IZK6 566 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 NECAB1Q8N987 351 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 RNF149Q8NC42 400 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 ZSWIM2Q8NEG5 633 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 DPF1Q92782 380 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 TCEAL3Q969E4 200 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 CAVIN3Q969G5 261 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 NT5C3BQ969T7 300 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 TP53INP1Q96A56 240 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 ISG20Q96AZ6 181 aaKnown RBP7.4□□□□□ -1.22
HDAC3-216ENST00000523088 TESCQ96BS2 214 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 REPS1Q96D71 796 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 TSPAN17Q96FV3 270 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 PDLIM5Q96HC4 596 aaKnown RBP7.4□□□□□ -1.22
HDAC3-216ENST00000523088 PPP1R2P1Q96PQ5 205 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 NACC1Q96RE7 527 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 CITED4Q96RK1 184 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 KRT12Q99456 494 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 HSD17B14Q9BPX1 270 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 PHF7Q9BWX1 381 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-216ENST00000523088 GOLPH3Q9H4A6 298 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 IGFLR1Q9H665 355 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 BRD7Q9NPI1 651 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 DUSP22Q9NRW4 184 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 IGSF9Q9P2J2 1179 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 CTSFQ9UBX1 484 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 ZMYM5Q9UJ78 669 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 NOCTQ9UK39 431 aaKnown RBP7.4□□□□□ -1.22
HDAC3-216ENST00000523088 DBR1Q9UK59 544 aaKnown RBP7.4□□□□□ -1.22
HDAC3-216ENST00000523088 POU2F3Q9UKI9 436 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 CDH7Q9ULB5 785 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 NCKAP1Q9Y2A7 1128 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 GDAQ9Y2T3 454 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 NUBP2Q9Y5Y2 271 aa7.4□□□□□ -1.22
HDAC3-216ENST00000523088 MTCL1Q9Y4B5 1905 aaKnown RBP7.4□□□□□ -1.23
HDAC3-216ENST00000523088 GNG14A0A1W2PPG7 69 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 PIPSLA2A3N6 862 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 PRR23AA6NEV1 266 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 FAM205CA6NFA0 338 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 CCDC160A6NGH7 325 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 H7C4K7 107 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 ABCD4O14678 606 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 INPPL1O15357 1258 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 CALUO43852 315 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 OAZ2O95190 189 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 PRAMEF12O95522 483 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 C1RP00736 705 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 CDK1P06493 297 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 FCER2P06734 321 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 CHRM5P08912 532 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 OR52Z1P0C646 297 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 C6P13671 934 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 ETS2P15036 469 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF8P17098 575 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 NT5EP21589 574 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 RPA1P27694 616 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 CD1BP29016 333 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 CHRNA3P32297 505 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 GRK3P35626 688 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 UGT2B10P36537 528 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 GABRB2P47870 512 aa7.39□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF41P51814 821 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-216ENST00000523088 HK3P52790 923 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms