RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 NXPH1P58417 271 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 ACTR1AP61163 376 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 ILF3Q12906 894 aaKnown RBP eCLIP20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 TEAD4Q15561 434 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 SLC30A9Q6PML9 568 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 RASGRP3Q8IV61 690 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 TFGQ92734 400 aaPredicted RBP20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 MOCOSQ96EN8 888 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 RMDN2Q96LZ7 410 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 CFAP20Q9Y6A4 193 aaKnown RBP20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 KLK8O60259 260 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 SHOX2O60902 331 aaPredicted RBP20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 C1orf105O95561 183 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 JUNDP17535 347 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 IMPDH1P20839 514 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 GRK2P25098 689 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 SEC24CP53992 1094 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 BST1Q10588 318 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 FBXO48Q5FWF7 155 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 CFAP157Q5JU67 520 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 CES4AQ5XG92 561 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 CAPRIN2Q6IMN6 1127 aaKnown RBP20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 UNC5DQ6UXZ4 953 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 MBOAT1Q6ZNC8 495 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 RGS9BPQ6ZS82 235 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 PHC3Q8NDX5 983 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 TMEM237Q96Q45 408 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 TBC1D29Q9UFV1 150 aa20.85■□□□□ 0.93
R3HCC1-208ENST00000522012 A0A1B0GTW7 788 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 GMNCA6NCL1 334 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 PRR5-ARHGAP8B1AHC4 643 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 KLF11O14901 512 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 SIX3O95343 332 aaPredicted RBP20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 ANXA5P08758 320 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 AGTR2P50052 363 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 HERVK_113P63132 956 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 C18orf21Q32NC0 220 aaPredicted RBP20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 SULT1C3Q6IMI6 304 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 FAM47EQ6ZV65 393 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 NRROSQ86YC3 692 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 PDPRQ8NCN5 879 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 CHMP6Q96FZ7 201 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 ZC3H10Q96K80 434 aaKnown RBP20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 C12orf66Q96MD2 445 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 INSM2Q96T92 566 aaPredicted RBP20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 ERVK-6Q9BXR3 956 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 GSDMCQ9BYG8 508 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 APOBEC3BQ9UH17 382 aaKnown RBP20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 CIDEBQ9UHD4 219 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 PLXND1Q9Y4D7 1925 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 CACNA1IQ9P0X4 2223 aa20.84■□□□□ 0.93
R3HCC1-208ENST00000522012 A0A1B0GVT2 93 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 KRT87PA6NCN2 255 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 LRRC14BA6NHZ5 514 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 STX16-NPEPL1H3BU86 382 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 STX16O14662 325 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 CSF2P04141 144 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 EEF1DP29692 281 aaKnown RBP20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 AP1S2P56377 157 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 CDKL1Q00532 357 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 C1orf61Q13536 156 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 SIM2Q14190 667 aaPredicted RBP20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 CLCA4Q14CN2 919 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 SETDB1Q15047 1291 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 UAP1L1Q3KQV9 507 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 CCSMST1Q4G0I0 132 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 ZNF678Q5SXM1 525 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 TTC23LQ6PF05 361 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 LRRC34Q8IZ02 419 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 ZBTB44Q8NCP5 570 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 OR6Y1Q8NGX8 325 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 GPBAR1Q8TDU6 330 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 PIGKQ92643 395 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 ESAMQ96AP7 390 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 L3HYPDHQ96EM0 354 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 ZNF317Q96PQ6 595 aaPredicted RBP20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 KCNH6Q9H252 994 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 ZNF395Q9H8N7 513 aaPredicted RBP20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 SLCO1B3Q9NPD5 702 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 TMEM74BQ9NUR3 256 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 IMP3Q9NV31 184 aaKnown RBP20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 WWOXQ9NZC7 414 aa20.83■□□□□ 0.93
R3HCC1-208ENST00000522012 SUPT7LO94864 414 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 RPN2P04844 631 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 HALP42357 657 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 SLC1A6P48664 564 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 ABCE1P61221 599 aaKnown RBP20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 PRRT3Q5FWE3 981 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 CDKL4Q5MAI5 379 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 PRAMEF14Q5SWL7 426 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 PRR23BQ6ZRT6 265 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 TAF8Q7Z7C8 310 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 OR5AR1Q8NGP9 310 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 MAGEC3Q8TD91 643 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 PPP4R1Q8TF05 950 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 RHBDF1Q96CC6 855 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 CCDC138Q96M89 665 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 FERD3LQ96RJ6 166 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 PKP4Q99569 1192 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms