RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 TRPV3Q8NET8 790 aa25.18■■□□□ 1.62
COL13A1-213ENST00000520267 CYB5D2Q8WUJ1 264 aa25.18■■□□□ 1.62
COL13A1-213ENST00000520267 SCAMP4Q969E2 229 aa25.18■■□□□ 1.62
COL13A1-213ENST00000520267 SLC32A1Q9H598 525 aa25.18■■□□□ 1.62
COL13A1-213ENST00000520267 DUS2Q9NX74 493 aaKnown RBP25.18■■□□□ 1.62
COL13A1-213ENST00000520267 PKD2L2Q9NZM6 624 aa25.18■■□□□ 1.62
COL13A1-213ENST00000520267 ERVW-1Q9UQF0 538 aa25.18■■□□□ 1.62
COL13A1-213ENST00000520267 NEUROG3Q9Y4Z2 214 aa25.18■■□□□ 1.62
COL13A1-213ENST00000520267 INSL6Q9Y581 213 aa25.18■■□□□ 1.62
COL13A1-213ENST00000520267 IFRD1O00458 451 aaPredicted RBP25.17■■□□□ 1.62
COL13A1-213ENST00000520267 PABPC4LP0CB38 370 aaKnown RBP25.17■■□□□ 1.62
COL13A1-213ENST00000520267 ATP1B2P14415 290 aaPredicted RBP25.17■■□□□ 1.62
COL13A1-213ENST00000520267 AKT1P31749 480 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 MTPNP58546 118 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 HSD11B1LQ7Z5J1 315 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 SKA2Q8WVK7 121 aaPredicted RBP25.17■■□□□ 1.62
COL13A1-213ENST00000520267 USP7Q93009 1102 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 PRPF18Q99633 342 aaKnown RBP25.17■■□□□ 1.62
COL13A1-213ENST00000520267 CGREF1Q99674 301 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 CXXC1Q9P0U4 656 aaPredicted RBP25.17■■□□□ 1.62
COL13A1-213ENST00000520267 WNT6Q9Y6F9 365 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 A0A1W2PQ67 120 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 GNPDA1P46926 289 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 PWP1Q13610 501 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 ZNF77Q15935 545 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 IMPG1Q17R60 797 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 LIX1Q8N485 282 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 SLC12A9Q9BXP2 914 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 RPF2Q9H7B2 306 aaKnown RBP25.17■■□□□ 1.62
COL13A1-213ENST00000520267 LRTM1Q9HBL6 345 aa25.17■■□□□ 1.62
COL13A1-213ENST00000520267 PRRC2BQ5JSZ5 2229 aaKnown RBP25.17■■□□□ 1.62
COL13A1-213ENST00000520267 TTC34A8MYJ7 566 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 PDLIM1O00151 329 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 SEC22BO75396 215 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 CLDN9O95484 217 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 GGT5P36269 586 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 RECQLP46063 649 aaPredicted RBP25.16■■□□□ 1.62
COL13A1-213ENST00000520267 MAD2L1Q13257 205 aaPredicted RBP25.16■■□□□ 1.62
COL13A1-213ENST00000520267 BOP1Q14137 746 aaKnown RBP25.16■■□□□ 1.62
COL13A1-213ENST00000520267 FXNQ16595 210 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 CPSF6Q16630 551 aaKnown RBP eCLIP25.16■■□□□ 1.62
COL13A1-213ENST00000520267 SMU1Q2TAY7 513 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 CNPY1Q3B7I2 92 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 SLC44A4Q53GD3 710 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 CARM1Q86X55 608 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 ZSWIM3Q96MP5 696 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 ACTR8Q9H981 624 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 PARVBQ9HBI1 364 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 EIF3FO00303 357 aaPredicted RBP25.16■■□□□ 1.62
COL13A1-213ENST00000520267 NUAK1O60285 661 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 LEFTY1O75610 366 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 TFAP2AP05549 437 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 DMC1Q14565 340 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 CDKL4Q5MAI5 379 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 PRR23BQ6ZRT6 265 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 CBR4Q8N4T8 237 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 FRS2Q8WU20 508 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 ASB11Q8WXH4 323 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 BIRC7Q96CA5 298 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 HEPHQ9BQS7 1158 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 SLC29A3Q9BZD2 475 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 MTG2Q9H4K7 406 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 ANAPC2Q9UJX6 822 aa25.16■■□□□ 1.62
COL13A1-213ENST00000520267 FGF19O95750 216 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 CLPTM1O96005 669 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 AASDHQ4L235 1098 aaPredicted RBP25.15■■□□□ 1.62
COL13A1-213ENST00000520267 ARSIQ5FYB1 569 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 NHSL2Q5HYW2 709 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 INTS11Q5TA45 600 aaKnown RBP25.15■■□□□ 1.62
COL13A1-213ENST00000520267 BRAT1Q6PJG6 821 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 SUSD1Q6UWL2 747 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 POF1BQ8WVV4 589 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 MRGPRX3Q96LB0 322 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 KRT87PA6NCN2 255 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 PLOD2O00469 737 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 FESP07332 822 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 C8GP07360 202 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 POLR2EP19388 210 aaKnown RBP25.15■■□□□ 1.62
COL13A1-213ENST00000520267 VIPR1P32241 457 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 CTNNB1P35222 781 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 CCT8P50990 548 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 POLE2P56282 527 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 Q6ZVL8 140 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 KIAA0907Q7Z7F0 614 aaPredicted RBP25.15■■□□□ 1.62
COL13A1-213ENST00000520267 PROSER1Q86XN7 944 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 SLC13A3Q8WWT9 602 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 CENPNQ96H22 339 aaPredicted RBP25.15■■□□□ 1.62
COL13A1-213ENST00000520267 ZBTB18Q99592 522 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 DPY30Q9C005 99 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 FAM83DQ9H4H8 585 aa25.15■■□□□ 1.62
COL13A1-213ENST00000520267 A0A1B0GTW7 788 aa25.14■■□□□ 1.62
COL13A1-213ENST00000520267 DFNA5O60443 496 aa25.14■■□□□ 1.62
COL13A1-213ENST00000520267 PDYNP01213 254 aa25.14■■□□□ 1.62
COL13A1-213ENST00000520267 FGBP02675 491 aa25.14■■□□□ 1.62
COL13A1-213ENST00000520267 MPC1LP0DKB6 136 aa25.14■■□□□ 1.62
COL13A1-213ENST00000520267 CLCN2P51788 898 aa25.14■■□□□ 1.62
COL13A1-213ENST00000520267 FAM174BQ3ZCQ3 159 aa25.14■■□□□ 1.62
COL13A1-213ENST00000520267 GLYATQ6IB77 296 aa25.14■■□□□ 1.62
COL13A1-213ENST00000520267 PLPP6Q8IY26 295 aa25.14■■□□□ 1.62
COL13A1-213ENST00000520267 KRTCAP2Q8N6L1 136 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms