RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 APPL2Q8NEU8 664 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ZNF473Q8WTR7 871 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 NDRG1Q92597 394 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 KCNJ9Q92806 393 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 RTP4Q96DX8 246 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 FBXL20Q96IG2 436 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 HSFY1Q96LI6 401 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 SERPINB12Q96P63 405 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 LENG8Q96PV6 779 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 RNF157Q96PX1 679 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 XPO6Q96QU8 1125 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 GAD1Q99259 594 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 HNRNPABQ99729 332 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 NPAS1Q99742 590 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 SELENOSQ9BQE4 189 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 RTP3Q9BQQ7 232 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 SYT15Q9BQS2 421 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ZNF670Q9BS34 389 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ELOVL1Q9BW60 279 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CALN1Q9BXU9 219 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ITPAQ9BY32 194 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ROPN1BQ9BZX4 212 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CTDSP1Q9GZU7 261 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CNOT10Q9H9A5 744 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ROPN1Q9HAT0 212 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 BRF2Q9HAW0 419 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 USP29Q9HBJ7 922 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 KLC4Q9NSK0 619 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 ZDHHC7Q9NXF8 308 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 NKIRAS2Q9NYR9 191 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 MGAT4CQ9UBM8 478 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 DKK3Q9UBP4 350 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 SLC25A10Q9UBX3 287 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 CD207Q9UJ71 328 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 SARDHQ9UL12 918 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 MFHAS1Q9Y4C4 1052 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 PIAS3Q9Y6X2 628 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 KAT6AQ92794 2004 aa4.83□□□□□ -1.64
CTNNA1-212ENST00000518919 PCNTO95613 3336 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 CASP8AP2Q9UKL3 1982 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ATXN2Q99700 1313 aaKnown RBP4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 GAGE10A6NGK3 116 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ARL5CA6NH57 179 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 OTOL1A6NHN0 477 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 CASTOR2A6NHX0 329 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 NPIPB13A6NJU9 1138 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM90A7PA6NKC0 464 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 NPIPB5A8MRT5 1133 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM90A22PA8MWA6 464 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM90A12PA8MX19 464 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM90A23PA8MXZ1 464 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 NPIPB4C9JG80 1138 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 HHLA1C9JL84 531 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 E7ESA3 106 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 GOLGA8MH3BSY2 632 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 M0QZ92 97 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 SYN3O14994 580 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ALOX15BO15296 676 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 YY2O15391 372 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 PRICKLE3O43900 615 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 PRAMEF2O60811 474 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 HUS1O60921 280 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 BEST1O76090 585 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 CCNDBP1O95273 360 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ASGR1P07306 291 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 UBL4AP11441 157 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 LYL1P12980 280 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 LAMP2P13473 410 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ZFXP17010 805 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 TGM2P21980 687 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 CYP2F1P24903 491 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ZFP36P26651 326 aaKnown RBP4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ARL1P40616 181 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 SULT1E1P49888 294 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 DIO1P49895 249 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 SELENOPP49908 381 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 CLCNKBP51801 687 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 GPX6P59796 221 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 RPS3AP61247 264 aaKnown RBP4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 BMPR2Q13873 1038 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 TFDP2Q14188 446 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 PDK2Q15119 407 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 GXYLT1Q4G148 440 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ODF2Q5BJF6 829 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM133BQ5BKY9 247 aaKnown RBP4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ANKRD20A8PQ5CZ79 823 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ZNF766Q5HY98 468 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 FNBP1LQ5T0N5 605 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ERMARDQ5T6L9 678 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 MFSD4BQ5TF39 518 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 NCBP2-AS2Q69YL0 99 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 SCYL2Q6P3W7 929 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 KLHL24Q6TFL4 600 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 CLEC20AQ6ZU45 233 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 Q6ZWC4 215 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 ARCQ7LC44 396 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 CTU1Q7Z7A3 348 aaKnown RBP4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 GPR149Q86SP6 731 aa4.82□□□□□ -1.64
CTNNA1-212ENST00000518919 CROCCP2Q86T23 111 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms