RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 VN1R1Q9GZP7 353 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 ARRDC1-AS1Q9H2J1 176 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 SDF2L1Q9HCN8 221 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 OLAHQ9NV23 265 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 DPP3Q9NY33 737 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 TAB2Q9NYJ8 693 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 HAO2Q9NYQ3 351 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 SLC7A7Q9UM01 511 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 TRPV2Q9Y5S1 764 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 SCN5AQ14524 2016 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 NACADO15069 1562 aa3.42□□□□□ -1.86
VPS13B-207ENST00000518569 A0A1W2PRB8 838 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 TRBC2A0A5B9 178 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 FEZF1A0PJY2 475 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 E9PI62 339 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 CAVIN2O95810 425 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 TRUB2O95900 331 aaKnown RBP3.41□□□□□ -1.86
VPS13B-207ENST00000518569 TSHBP01222 138 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 NR3C1P04150 777 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 ACP2P11117 423 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 LIFP15018 202 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 MTHFRP42898 656 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 ZNF75DP51815 510 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 HSPB3Q12988 150 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 TMEM266Q2M3C6 531 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 ZC2HC1CQ53FD0 456 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-207ENST00000518569 SFMBT2Q5VUG0 894 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 SLC30A6Q6NXT4 461 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 ZNF554Q86TJ5 538 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 COMMD2Q86X83 199 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 ZNF595Q8IYB9 648 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 CEP57L1Q8IYX8 460 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 KCTD6Q8NC69 237 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 PGAP3Q96FM1 320 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-207ENST00000518569 PGLYRP2Q96PD5 576 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 SEPHS2Q99611 448 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 OLFM1Q99784 485 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 OPA3Q9H6K4 179 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 NOL11Q9H8H0 719 aaKnown RBP3.41□□□□□ -1.86
VPS13B-207ENST00000518569 ECHDC1Q9NTX5 307 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 ZNF701Q9NV72 531 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-207ENST00000518569 OSER1Q9NX31 292 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 ADPRHL2Q9NX46 363 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-207ENST00000518569 OSGIN1Q9UJX0 560 aa3.41□□□□□ -1.86
VPS13B-207ENST00000518569 A0A1W2PN81 502 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 HYKKA2RU49 373 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 OR6C76A6NM76 312 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 UBE2CO00762 179 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 KRT86O43790 486 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 PCDH7O60245 1069 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 WDPCPO95876 746 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 IGKV3-20P01619 116 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 DNTTP04053 509 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 GNAZP19086 355 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 EPHA2P29317 976 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 KRT20P35900 424 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 CHRNA7P36544 502 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 CX3CL1P78423 397 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 PRKCZQ05513 592 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 KRT81Q14533 505 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 PTPRCAPQ14761 206 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 CDC37Q16543 378 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-207ENST00000518569 KYNUQ16719 465 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 KRTAP24-1Q3LI83 254 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 TCP11X2Q5H9J9 407 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 PLA2G4FQ68DD2 849 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 RPUSD3Q6P087 351 aaKnown RBP3.4□□□□□ -1.87
VPS13B-207ENST00000518569 TMPRSS11FQ6ZWK6 438 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 USP43Q70EL4 1123 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 FOXP4Q8IVH2 680 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-207ENST00000518569 TTC30BQ8N4P2 665 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 STPG4Q8N801 248 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 TRIML1Q8N9V2 468 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 TDRD5Q8NAT2 981 aaKnown RBP3.4□□□□□ -1.87
VPS13B-207ENST00000518569 OR5M8Q8NGP6 311 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 SPATA3Q8NHX4 192 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 FCAMRQ8WWV6 532 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 HSD17B8Q92506 261 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 DHX58Q96C10 678 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 ZNF524Q96C55 264 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 CFAP57Q96MR6 1250 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 MYADMQ96S97 322 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 RTP3Q9BQQ7 232 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 GOLPH3LQ9H4A5 285 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 RABEP2Q9H5N1 569 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 PRMT7Q9NVM4 692 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-207ENST00000518569 ZNF624Q9P2J8 865 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-207ENST00000518569 FLT1P17948 1338 aa3.4□□□□□ -1.87
VPS13B-207ENST00000518569 EIF4G1Q04637 1599 aaKnown RBP3.39□□□□□ -1.87
VPS13B-207ENST00000518569 A0A087WYN8 130 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 A0A0G2JLW4 131 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 EDDM13A0A1B0GTR0 161 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 PMS2P5A8MQ11 134 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 SMIM1B2RUZ4 78 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 GAPDHSO14556 408 aaPredicted RBP3.39□□□□□ -1.87
VPS13B-207ENST00000518569 PIGNO95427 931 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 RAB40ALP0C0E4 278 aa3.39□□□□□ -1.87
VPS13B-207ENST00000518569 MYBL1P10243 752 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms