RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 TRUB2O95900 331 aaKnown RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GSRP00390 522 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IGKV3-15P01624 115 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IGLV1-44P01699 117 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IGHV3-13P01766 116 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 THY1P04216 161 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 EDN1P05305 212 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 QDPRP09417 244 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 OR52Z1P0C646 297 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZCCHC18P0CG32 403 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IGHV4-38-2P0DP08 117 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 F3P13726 295 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IDEP14735 1019 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 LIFP15018 202 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF8P17098 575 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CEBPBP17676 345 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PTPN2P17706 415 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ITIH1P19827 911 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PRKACGP22612 351 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MCCP23508 829 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IL4RP24394 825 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MCM3P25205 808 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MT3P25713 68 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 NFKBIAP25963 317 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 POU1F1P28069 291 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PSMB4P28070 264 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PDHA2P29803 388 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TLX1P31314 330 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 AHRP35869 848 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CPOXP36551 454 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 VEGFCP49767 419 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CCR3P51677 355 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PRELPP51888 382 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MAPK12P53778 367 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 OAZ1P54368 228 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 POLR2LP62875 67 aaKnown RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PITX1P78337 314 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DLK1P80370 383 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TLE2Q04725 743 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 UBE3AQ05086 875 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FOXM1Q08050 763 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FOXO1Q12778 655 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 IKQ13123 557 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TUBB2AQ13885 445 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KIAA0141Q14154 515 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 EIF4A2Q14240 407 aaKnown RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MELKQ14680 651 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KIR2DS3Q14952 304 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 NONOQ15233 471 aaKnown RBP eCLIP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SIX1Q15475 284 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MEP1AQ16819 746 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 DUOXA1Q1HG43 343 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF630Q2M218 657 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TMEM44Q2T9K0 475 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ALDH1L2Q3SY69 923 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TBRG1Q3YBR2 411 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CMPK2Q5EBM0 449 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FBXO47Q5MNV8 452 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 C9orf129Q5T035 196 aaKnown RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GARNL3Q5VVW2 1013 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SUSD4Q5VX71 490 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GGNBP1Q5YKI7 109 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SEL1L3Q68CR1 1132 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ACAD10Q6JQN1 1059 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FAM180BQ6P0A1 224 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CDC73Q6P1J9 531 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF530Q6P9A1 599 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KCTD18Q6PI47 426 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PAPD4Q6PIY7 484 aaKnown RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GDPGP1Q6ZNW5 385 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 NOL8Q76FK4 1167 aaKnown RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PLPPR4Q7Z2D5 763 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CACNA2D4Q7Z3S7 1137 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CPLX4Q7Z7G2 160 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 PATL1Q86TB9 770 aaKnown RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SYVN1Q86TM6 617 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 LDB1Q86U70 411 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ZNF589Q86UQ0 364 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 GPR180Q86V85 440 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KBTBD6Q86V97 674 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SLC47A2Q86VL8 602 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 LONP2Q86WA8 852 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TMC8Q8IU68 726 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TGIF2LYQ8IUE0 185 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CCDC71Q8IV32 467 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FBXO16Q8IX29 292 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 OR4N5Q8IXE1 308 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MMD2Q8IY49 270 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 CFAP206Q8IYR0 622 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 ANKRD13AQ8IZ07 590 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KIRREL3Q8IZU9 778 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FAM185AQ8N0U4 392 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 MTURNQ8N3F0 131 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 AFAP1Q8N556 730 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 TTC39CQ8N584 583 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 C1orf52Q8N6N3 182 aaKnown RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 FRMD1Q8N878 549 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 WDSUB1Q8N9V3 476 aa0.21□□□□□ -2.38
RNU6-1049P-201ENST00000516414 SLC38A9Q8NBW4 561 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms