RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 THUMPD3Q9BV44 507 aaKnown RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 KIFC3Q9BVG8 833 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 RAB6CQ9H0N0 254 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 COPS7BQ9H9Q2 264 aaPredicted RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 ZFP57Q9NU63 452 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 WSB2Q9NYS7 404 aaPredicted RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 WDR35Q9P2L0 1181 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 TUBE1Q9UJT0 475 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 OSGIN1Q9UJX0 560 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 FBXL2Q9UKC9 423 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 PTRH2Q9Y3E5 179 aaKnown RBP3.09□□□□□ -1.91
HERC4-215ENST00000515753 CLIC4Q9Y696 253 aa3.09□□□□□ -1.91
HERC4-215ENST00000515753 MSH6P52701 1360 aa3.09□□□□□ -1.92
HERC4-215ENST00000515753 ARHGAP31Q2M1Z3 1444 aa3.09□□□□□ -1.92
HERC4-215ENST00000515753 NCOA3Q9Y6Q9 1424 aa3.09□□□□□ -1.92
HERC4-215ENST00000515753 GREB1LQ9C091 1923 aaPredicted RBP3.09□□□□□ -1.92
HERC4-215ENST00000515753 SYCP2Q9BX26 1530 aa3.09□□□□□ -1.92
HERC4-215ENST00000515753 UGGT1Q9NYU2 1555 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 MYO5CQ9NQX4 1742 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 ZCWPW2A0A1B0GU75 182 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 ANTXRLA6NF34 631 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 FAM72CH0Y354 149 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 C16orf97H3BN30 126 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 PSMD14O00487 310 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 HS3ST1O14792 307 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 PAPSS1O43252 624 aaPredicted RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 XPNPEP2O43895 674 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 FGF17O60258 216 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 MITFO75030 526 aaPredicted RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 TPOP07202 933 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 TUBBP07437 444 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 THEGLP0DJG4 465 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 CETPP11597 493 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 ACTN1P12814 892 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 PAX1P15863 534 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 PON1P27169 355 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 GNL1P36915 607 aaPredicted RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 CAMPP49913 170 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 CRIP2P52943 208 aaPredicted RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 CLDN20P56880 219 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 TAS2R40P59535 323 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 TMF1P82094 1093 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 GTF2H2Q13888 395 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 SLMAPQ14BN4 828 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 MORF4L2Q15014 288 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 RBBP5Q15291 538 aaKnown RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 E2F5Q15329 346 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 ZSCAN23Q3MJ62 389 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 KRTCAP3Q53RY4 240 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 FAM72AQ5TYM5 149 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 KIAA0930Q6ICG6 404 aaPredicted RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 FAM72DQ6L9T8 149 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 ADAM5Q6NVV9 412 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 GTF2H2CQ6P1K8 395 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 Q75L30 129 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 MARK2Q7KZI7 788 aaKnown RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 ATG9AQ7Z3C6 839 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 GLRX5Q86SX6 157 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 GPR180Q86V85 440 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 FAM72BQ86X60 149 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 CCDC170Q8IYT3 715 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 SLC38A9Q8NBW4 561 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 MCUQ8NE86 351 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 ACVR1CQ8NER5 493 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 Q8NFD4 153 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 OR14L1PQ8NHC6 308 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 KIF18AQ8NI77 898 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 TAF15Q92804 592 aaKnown RBP eCLIP3.08□□□□□ -1.92
HERC4-215ENST00000515753 SECISBP2LQ93073 1101 aaKnown RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 MOAP1Q96BY2 351 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 TMCO6Q96DC7 493 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 SCRN2Q96FV2 425 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 SLC25A23Q9BV35 468 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 DENND2DQ9H6A0 471 aaPredicted RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 OPA3Q9H6K4 179 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 SLC28A3Q9HAS3 691 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 LRRC4Q9HBW1 653 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 ZNF334Q9HCZ1 680 aaPredicted RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 RANGRFQ9HD47 186 aaPredicted RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 MBNL1Q9NR56 388 aaKnown RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 ADPRHL2Q9NX46 363 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 EPS15L1Q9UBC2 864 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 STK39Q9UEW8 545 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 OR14J1Q9UGF5 321 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 AMACRQ9UHK6 382 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 RALYQ9UKM9 306 aaKnown RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 NENFQ9UMX5 172 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 EXO1Q9UQ84 846 aaKnown RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 OR2W1Q9Y3N9 320 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 JCADQ9P266 1359 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 TMEM2Q9UHN6 1383 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 MYOM3Q5VTT5 1437 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 SCAF11Q99590 1463 aaKnown RBP3.08□□□□□ -1.92
HERC4-215ENST00000515753 ABCA6Q8N139 1617 aa3.08□□□□□ -1.92
HERC4-215ENST00000515753 LRRC72A6NJI9 287 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 A6NL46 340 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 C19orf81C9J6K1 198 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 ANKRD28O15084 1053 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 ZNHIT1O43257 154 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 BUD23O43709 281 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms