RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 NAP1L3Q99457 506 aaPredicted RBP11.16□□□□□ -0.62
VCAN-212ENST00000515397 B3GNT4Q9C0J1 378 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 RAB33BQ9H082 229 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 MVB12BQ9H7P6 319 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 SOHLH2Q9NX45 425 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 SPHK1Q9NYA1 384 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 GALPQ9UBC7 116 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 LNPEPQ9UIQ6 1025 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 SOX13Q9UN79 622 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 ICKQ9UPZ9 632 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 RUVBL2Q9Y230 463 aaKnown RBP11.16□□□□□ -0.62
VCAN-212ENST00000515397 CDYLQ9Y232 598 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 CRYL1Q9Y2S2 319 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 MAD1L1Q9Y6D9 718 aa11.16□□□□□ -0.62
VCAN-212ENST00000515397 ATMQ13315 3056 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 TLCD2A6NGC4 264 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 SDR42E2A6NKP2 422 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 ATXN7O15265 892 aaPredicted RBP11.15□□□□□ -0.62
VCAN-212ENST00000515397 TOX3O15405 576 aaPredicted RBP11.15□□□□□ -0.62
VCAN-212ENST00000515397 PRKAR1AP10644 381 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 ST6GAL1P15907 406 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 AOAHP28039 575 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 MAGEA6P43360 314 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 SARNPP82979 210 aaKnown RBP11.15□□□□□ -0.62
VCAN-212ENST00000515397 PRKAA1Q13131 559 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 PPP1R7Q15435 360 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 ANKRD20A4Q4UJ75 823 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 CTSL3PQ5NE16 218 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 HP1BP3Q5SSJ5 553 aaPredicted RBP11.15□□□□□ -0.62
VCAN-212ENST00000515397 FAM199XQ6PEV8 388 aaPredicted RBP11.15□□□□□ -0.62
VCAN-212ENST00000515397 TAX1BP1Q86VP1 789 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 NAT8LQ8N9F0 302 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 UBXN4Q92575 508 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 TTC9Q92623 222 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 ZNF669Q96BR6 464 aaPredicted RBP11.15□□□□□ -0.62
VCAN-212ENST00000515397 SGSM3Q96HU1 749 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 PWWP2AQ96N64 755 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 SERPINB12Q96P63 405 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 TEFMQ96QE5 360 aaKnown RBP11.15□□□□□ -0.62
VCAN-212ENST00000515397 RUFY1Q96T51 708 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 CARD6Q9BX69 1037 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 P2RY12Q9H244 342 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 TFB2MQ9H5Q4 396 aaKnown RBP11.15□□□□□ -0.62
VCAN-212ENST00000515397 FGF21Q9NSA1 209 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 ACTR10Q9NZ32 417 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 SEMA5BQ9P283 1151 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 ASIC3Q9UHC3 531 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 POMT2Q9UKY4 750 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 KLHL20Q9Y2M5 609 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 NFS1Q9Y697 457 aa11.15□□□□□ -0.62
VCAN-212ENST00000515397 KALRNO60229 2985 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 CFAP46Q8IYW2 2715 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 GOLGA6L10A0A0M3HER8 536 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 AP3B1O00203 1094 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 QSOX1O00391 747 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 NIPSNAP2O75323 286 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 KATNA1O75449 491 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 GPC4O75487 556 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 DLGAP3O95886 979 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 CTSBP07858 339 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 FGF5P12034 268 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 PPARGP37231 505 aaPredicted RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 PTGIRP43119 386 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 FNTAP49354 379 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 TTPAP49638 278 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 HSD11B2P80365 405 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 RHDQ02161 417 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 CTBP1Q13363 440 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 DHX34Q14147 1143 aaKnown RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 IL11RAQ14626 422 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 LINC00303Q3SY05 128 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 CCSMST1Q4G0I0 132 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 MSS51Q4VC12 460 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 AARS2Q5JTZ9 985 aaKnown RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 PAPD7Q5XG87 772 aaKnown RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 NEPROQ6NW34 567 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 C16orf46Q6P387 395 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 C6orf15Q6UXA7 325 aaPredicted RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 CENPUQ71F23 418 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 SDCCAG8Q86SQ7 713 aaPredicted RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 PPP1R3BQ86XI6 285 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 CREG2Q8IUH2 290 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 DENND6AQ8IWF6 608 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 D2HGDHQ8N465 521 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 EXD3Q8N9H8 876 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 MCUQ8NE86 351 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 SNRNP27Q8WVK2 155 aaKnown RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 SKA2Q8WVK7 121 aaPredicted RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 PEX13Q92968 403 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 SIGLEC10Q96LC7 697 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 BIRC8Q96P09 236 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 NAPGQ99747 312 aaPredicted RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 ZPBPQ9BS86 351 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 SLC12A9Q9BXP2 914 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 TRIT1Q9H3H1 467 aaKnown RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 GPN2Q9H9Y4 310 aaPredicted RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 MRM3Q9HC36 420 aaKnown RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 PDE7BQ9NP56 450 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 FBXO6Q9NRD1 293 aaPredicted RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 SAMD15Q9P1V8 674 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms