RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 GOLGA8RI6L899 631 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 SLC16A5O15375 505 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 OPA1O60313 960 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 GSTA1P08263 222 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 CD1DP15813 335 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 FASLGP48023 281 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 UBE2IP63279 158 aaKnown RBP20.46■□□□□ 0.87
LSM6-207ENST00000515311 DLG1Q12959 904 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 C14orf28Q4W4Y0 310 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 SLC9B2Q86UD5 537 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 RBM12BQ8IXT5 1001 aaKnown RBP20.46■□□□□ 0.87
LSM6-207ENST00000515311 SRRM1Q8IYB3 904 aaKnown RBP20.46■□□□□ 0.87
LSM6-207ENST00000515311 TBC1D21Q8IYX1 336 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 EID2Q8N6I1 236 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 KYQ8NBH2 561 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 FBXO15Q8NCQ5 510 aaPredicted RBP20.46■□□□□ 0.87
LSM6-207ENST00000515311 OR5K2Q8NHB8 316 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 ZFPM2Q8WW38 1151 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 PATE1Q8WXA2 126 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 TSNARE1Q96NA8 513 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 TRIT1Q9H3H1 467 aaKnown RBP20.46■□□□□ 0.87
LSM6-207ENST00000515311 MKS1Q9NXB0 559 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 SIRPGQ9P1W8 387 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 CPNE7Q9UBL6 633 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 RUVBL2Q9Y230 463 aaKnown RBP20.46■□□□□ 0.87
LSM6-207ENST00000515311 CFAP20Q9Y6A4 193 aaKnown RBP20.46■□□□□ 0.87
LSM6-207ENST00000515311 COLEC10Q9Y6Z7 277 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 DNAH14Q0VDD8 3507 aa20.46■□□□□ 0.87
LSM6-207ENST00000515311 RIF1Q5UIP0 2472 aaKnown RBP20.45■□□□□ 0.86
LSM6-207ENST00000515311 BTN3A1O00481 513 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 SIGLEC6O43699 453 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 CATP04040 527 aaKnown RBP20.45■□□□□ 0.86
LSM6-207ENST00000515311 CD59P13987 128 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 GMPRP36959 345 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 SLC19A1P41440 591 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 KPNA2P52292 529 aaKnown RBP20.45■□□□□ 0.86
LSM6-207ENST00000515311 SLC18A2Q05940 514 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 ACAP2Q15057 778 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 KLC3Q6P597 504 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 ADAMTSL2Q86TH1 951 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 DCUN1D3Q8IWE4 304 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 SFTPA2Q8IWL1 248 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 TRIM48Q8IWZ4 208 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 SLC35F3Q8IY50 421 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 PLD6Q8N2A8 252 aaKnown RBP20.45■□□□□ 0.86
LSM6-207ENST00000515311 SPATA6LQ8N4H0 392 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 CFAP61Q8NHU2 1237 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 KIAA1191Q96A73 305 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 ALKBH8Q96BT7 664 aaKnown RBP20.45■□□□□ 0.86
LSM6-207ENST00000515311 NXNL1Q96CM4 212 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 GPR78Q96P69 363 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 SLC12A9Q9BXP2 914 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 TFB2MQ9H5Q4 396 aaKnown RBP20.45■□□□□ 0.86
LSM6-207ENST00000515311 STN1Q9H668 368 aaKnown RBP20.45■□□□□ 0.86
LSM6-207ENST00000515311 SLC40A1Q9NP59 571 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 DCDC2Q9UHG0 476 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 POLG2Q9UHN1 485 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 NOVA2Q9UNW9 492 aaKnown RBP20.45■□□□□ 0.86
LSM6-207ENST00000515311 ACTL7BQ9Y614 415 aa20.45■□□□□ 0.86
LSM6-207ENST00000515311 C4orf47A7E2U8 309 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 CDC7O00311 574 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 ZBTB14O43829 449 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 C1orf105O95561 183 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 ENO2P09104 434 aaPredicted RBP20.44■□□□□ 0.86
LSM6-207ENST00000515311 RPIAP49247 311 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 LIMK1P53667 647 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 KRT33BQ14525 404 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.44■□□□□ 0.86
LSM6-207ENST00000515311 AGBL2Q5U5Z8 902 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 DUS1LQ6P1R4 473 aaKnown RBP20.44■□□□□ 0.86
LSM6-207ENST00000515311 SBSNQ6UWP8 590 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 UBE2R2Q712K3 238 aaPredicted RBP20.44■□□□□ 0.86
LSM6-207ENST00000515311 ARL14Q8N4G2 192 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 GOLGA6L1Q8N7Z2 621 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 OR5AR1Q8NGP9 310 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 MAGEC3Q8TD91 643 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 ZBTB9Q96C00 473 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 FERD3LQ96RJ6 166 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 SMC6Q96SB8 1091 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 PARVBQ9HBI1 364 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 ADAMTS6Q9UKP5 1117 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 IKZF3Q9UKT9 509 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 BTBD3Q9Y2F9 522 aa20.44■□□□□ 0.86
LSM6-207ENST00000515311 ASCC3Q8N3C0 2202 aaKnown RBP20.43■□□□□ 0.86
LSM6-207ENST00000515311 TRBV23OR9-2A0A075B6M9 112 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 NPEPPSL1A6NEC2 478 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 ARHGEF33A8MVX0 844 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 GLRA3O75311 464 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 VIPP01282 170 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 TFEBP19484 476 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 CYP2A7P20853 494 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 CRHR1P34998 444 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 CCT5P48643 541 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 MAZP56270 477 aaKnown RBP20.43■□□□□ 0.86
LSM6-207ENST00000515311 HHEXQ03014 270 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 NR0B2Q15466 257 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 TSNQ15631 228 aaKnown RBP20.43■□□□□ 0.86
LSM6-207ENST00000515311 PPP1R3AQ16821 1122 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 PROX2Q3B8N5 592 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 STPG1Q5TH74 334 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms