RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 KIAA1143Q96AT1 154 aaPredicted RBP19.32■□□□□ 0.68
SFXN1-209ENST00000508290 OR6C1Q96RD1 312 aa19.32■□□□□ 0.68
SFXN1-209ENST00000508290 SPRY4Q9C004 299 aa19.32■□□□□ 0.68
SFXN1-209ENST00000508290 CPNE5Q9HCH3 593 aa19.32■□□□□ 0.68
SFXN1-209ENST00000508290 OR6C2Q9NZP2 312 aa19.32■□□□□ 0.68
SFXN1-209ENST00000508290 RPS6KL1Q9Y6S9 549 aa19.32■□□□□ 0.68
SFXN1-209ENST00000508290 PTPRQQ9UMZ3 2332 aa19.32■□□□□ 0.68
SFXN1-209ENST00000508290 IGHV5-51A0A0C4DH38 117 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 BHMG1C9JSJ3 638 aaPredicted RBP19.31■□□□□ 0.68
SFXN1-209ENST00000508290 ERVH48-1M5A8F1 160 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 TK2O00142 265 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 DNALI1O14645 258 aaPredicted RBP19.31■□□□□ 0.68
SFXN1-209ENST00000508290 STK17BO94768 372 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 TTC4O95801 387 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 MT-ND3P03897 115 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 MSL3P1P0C860 447 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 AOAHP28039 575 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 ABHD18Q0P651 414 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 HSPA14Q0VDF9 509 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 THOC5Q13769 683 aaKnown RBP19.31■□□□□ 0.68
SFXN1-209ENST00000508290 ANKRD20A4Q4UJ75 823 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 PLEKHS1Q5SXH7 462 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 ARHGAP40Q5TG30 622 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 OTOAQ7RTW8 1153 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 D2HGDHQ8N465 521 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 JPH3Q8WXH2 748 aaPredicted RBP19.31■□□□□ 0.68
SFXN1-209ENST00000508290 PMEPA1Q969W9 287 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 CRELD1Q96HD1 420 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 MAP3K3Q99759 626 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 HGH1Q9BTY7 390 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 RARRES3Q9UL19 164 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 BTRCQ9Y297 605 aa19.31■□□□□ 0.68
SFXN1-209ENST00000508290 AHCTF1Q8WYP5 2266 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 POLR2CP19387 275 aaPredicted RBP19.3■□□□□ 0.68
SFXN1-209ENST00000508290 ATP5DP30049 168 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 TERF1P54274 439 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 TUBB4BP68371 445 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 DR1Q01658 176 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 TUBB3Q13509 450 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 TUBB2AQ13885 445 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 MORF4L2Q15014 288 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 BRD3Q15059 726 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 TTC23LQ6PF05 361 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 MICALCLQ6ZW33 695 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 LDB1Q86U70 411 aaPredicted RBP19.3■□□□□ 0.68
SFXN1-209ENST00000508290 CILP2Q8IUL8 1156 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 DCUN1D3Q8IWE4 304 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 PHC3Q8NDX5 983 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 LPGAT1Q92604 370 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 ZNF669Q96BR6 464 aaPredicted RBP19.3■□□□□ 0.68
SFXN1-209ENST00000508290 STAMBPL1Q96FJ0 436 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 CAPZA3Q96KX2 299 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 CTRCQ99895 268 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 TUBB2BQ9BVA1 445 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 PITPNM3Q9BZ71 974 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 ULBP3Q9BZM4 244 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 FANCEQ9HB96 536 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 APMAPQ9HDC9 416 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 WDR70Q9NW82 654 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 CDYLQ9Y232 598 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 MAD1L1Q9Y6D9 718 aa19.3■□□□□ 0.68
SFXN1-209ENST00000508290 GSAPA4D1B5 854 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 GOLGA8MH3BSY2 632 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 EFSO43281 561 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 DLGAP3O95886 979 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 CDH3P22223 829 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 PRDX3P30048 256 aaKnown RBP19.29■□□□□ 0.68
SFXN1-209ENST00000508290 KPNA2P52292 529 aaKnown RBP19.29■□□□□ 0.68
SFXN1-209ENST00000508290 EIF3BP55884 814 aaKnown RBP19.29■□□□□ 0.68
SFXN1-209ENST00000508290 PPP1CAP62136 330 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 LONRF1Q17RB8 773 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 CES3Q6UWW8 571 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 RASGRP3Q8IV61 690 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 OR5AR1Q8NGP9 310 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 MAGEC3Q8TD91 643 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 FOPNLQ96NB1 174 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 RAB11FIP5Q9BXF6 653 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 LATS2Q9NRM7 1088 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 FGF21Q9NSA1 209 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 KLHL42Q9P2K6 505 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 COMMD10Q9Y6G5 202 aa19.29■□□□□ 0.68
SFXN1-209ENST00000508290 ZCWPW2A0A1B0GU75 182 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 PIPSLA2A3N6 862 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 BTN3A1O00481 513 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 ATXN7O15265 892 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-209ENST00000508290 ITGB2P05107 769 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 ITGB6P18564 788 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 PGAM1P18669 254 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 PTGIRP43119 386 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 RAB28P51157 221 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 SH3BP2P78314 561 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 PRKG2Q13237 762 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 ZNF470Q6ECI4 717 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 PDIK1LQ8N165 341 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 RAB42Q8N4Z0 105 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.28■□□□□ 0.68
SFXN1-209ENST00000508290 SLC22A18Q96BI1 424 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 LRRC39Q96DD0 335 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 SIGLEC10Q96LC7 697 aa19.28■□□□□ 0.68
SFXN1-209ENST00000508290 BIRC8Q96P09 236 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 467.5 ms