RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 DNAJB14Q8TBM8 379 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 IMP4Q96G21 291 aaKnown RBP5.58□□□□□ -1.52
GYPB-208ENST00000507009 RBM41Q96IZ5 413 aaKnown RBP5.58□□□□□ -1.52
GYPB-208ENST00000507009 RMDN2Q96LZ7 410 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 LRFN5Q96NI6 719 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 WDR77Q9BQA1 342 aaPredicted RBP5.58□□□□□ -1.52
GYPB-208ENST00000507009 ZNF670Q9BS34 389 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 HGH1Q9BTY7 390 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 MAK16Q9BXY0 300 aaKnown RBP5.58□□□□□ -1.52
GYPB-208ENST00000507009 SPRTNQ9H040 489 aaPredicted RBP5.58□□□□□ -1.52
GYPB-208ENST00000507009 ISCUQ9H1K1 167 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 FAM96AQ9H5X1 160 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 GLOD4Q9HC38 313 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 C1GALT1Q9NS00 363 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 ANO10Q9NW15 660 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 CTTNBP2NLQ9P2B4 639 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 FBXL4Q9UKA2 621 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 POMT2Q9UKY4 750 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 MYO6Q9UM54 1294 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 BTRCQ9Y297 605 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 PKP3Q9Y446 797 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 COLEC10Q9Y6Z7 277 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 OTOGQ6ZRI0 2925 aa5.58□□□□□ -1.52
GYPB-208ENST00000507009 DIDO1Q9BTC0 2240 aaKnown RBP5.58□□□□□ -1.52
GYPB-208ENST00000507009 CSMD1Q96PZ7 3565 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 TRGV8A0A0C4DH27 118 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 CCDC78A2IDD5 438 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 MGAT4DA6NG13 374 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 C2orf74A8MZ97 194 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 ESPNB1AK53 854 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 BTN3A3O00478 584 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 E2F3O00716 465 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 APOL1O14791 398 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 PPP1R12AO14974 1030 aaPredicted RBP5.57□□□□□ -1.52
GYPB-208ENST00000507009 KCNJ13O60928 360 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 KLF7O75840 302 aaPredicted RBP5.57□□□□□ -1.52
GYPB-208ENST00000507009 IGHEP01854 428 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 KRT1P04264 644 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 CTSBP07858 339 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 HBQ1P09105 142 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 COX6B1P14854 86 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 NFKB1P19838 968 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 ALAS2P22557 587 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 KDELR1P24390 212 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 NDUFS1P28331 727 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 PRKCIP41743 596 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 WNT3AP56704 352 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 IFI35P80217 286 aaPredicted RBP5.57□□□□□ -1.52
GYPB-208ENST00000507009 DCDP81605 110 aaKnown RBP5.57□□□□□ -1.52
GYPB-208ENST00000507009 TMPRSS15P98073 1019 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 PPIDQ08752 370 aaKnown RBP5.57□□□□□ -1.52
GYPB-208ENST00000507009 DMPKQ09013 629 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 ITGA9Q13797 1035 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 MESDQ14696 234 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 BRD3Q15059 726 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 SIRPB2Q5JXA9 342 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 METRNLQ641Q3 311 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 Q6ZS92 163 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 CDHR3Q6ZTQ4 885 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 MICALCLQ6ZW33 695 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 APTXQ7Z2E3 356 aaKnown RBP5.57□□□□□ -1.52
GYPB-208ENST00000507009 GDF7Q7Z4P5 450 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 PPP1R32Q7Z5V6 425 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 NXPE1Q8N323 547 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 METTL27Q8N6F8 245 aaPredicted RBP5.57□□□□□ -1.52
GYPB-208ENST00000507009 ZNF655Q8N720 491 aaPredicted RBP5.57□□□□□ -1.52
GYPB-208ENST00000507009 CATSPER1Q8NEC5 780 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 DDHD1Q8NEL9 900 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 ACVR1CQ8NER5 493 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 IPMKQ8NFU5 416 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 OR2L2Q8NH16 312 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 RAPGEF5Q92565 580 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 FATE1Q969F0 183 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 DCUN1D1Q96GG9 259 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 IP6K3Q96PC2 410 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 RNF157Q96PX1 679 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 SLC25A51Q9H1U9 297 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 FAM60AQ9NP50 221 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 ACTR10Q9NZ32 417 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 AIPL1Q9NZN9 384 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 CHMP5Q9NZZ3 219 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 TMEM63CQ9P1W3 806 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 NFKBIL1Q9UBC1 381 aaPredicted RBP5.57□□□□□ -1.52
GYPB-208ENST00000507009 CDC23Q9UJX2 597 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 ACSL5Q9ULC5 683 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 TDRKHQ9Y2W6 561 aaKnown RBP5.57□□□□□ -1.52
GYPB-208ENST00000507009 APCP25054 2843 aa5.57□□□□□ -1.52
GYPB-208ENST00000507009 NUP210LQ5VU65 1888 aa5.56□□□□□ -1.52
GYPB-208ENST00000507009 FER1L5A0AVI2 2057 aa5.56□□□□□ -1.52
GYPB-208ENST00000507009 A0A087X0T9 212 aa5.56□□□□□ -1.52
GYPB-208ENST00000507009 A0A1B0GUH1 482 aa5.56□□□□□ -1.52
GYPB-208ENST00000507009 AGPSO00116 658 aa5.56□□□□□ -1.52
GYPB-208ENST00000507009 MATN2O00339 956 aa5.56□□□□□ -1.52
GYPB-208ENST00000507009 IFRD1O00458 451 aaPredicted RBP5.56□□□□□ -1.52
GYPB-208ENST00000507009 CCL22O00626 93 aa5.56□□□□□ -1.52
GYPB-208ENST00000507009 STX7O15400 261 aaKnown RBP5.56□□□□□ -1.52
GYPB-208ENST00000507009 ZSCAN9O15535 394 aaPredicted RBP5.56□□□□□ -1.52
GYPB-208ENST00000507009 HCRTR1O43613 425 aa5.56□□□□□ -1.52
GYPB-208ENST00000507009 KLHL41O60662 606 aa5.56□□□□□ -1.52
GYPB-208ENST00000507009 CNOT3O75175 753 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms