RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 GRAPLQ8TC17 118 aaPredicted RBP2.64□□□□□ -1.99
GYPB-207ENST00000506679 ZFAND2BQ8WV99 257 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 LGALS12Q96DT0 336 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 SPACA9Q96E40 222 aaPredicted RBP2.64□□□□□ -1.99
GYPB-207ENST00000506679 ZNF830Q96NB3 372 aaPredicted RBP2.64□□□□□ -1.99
GYPB-207ENST00000506679 DUX3Q96PT4 197 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 LITAFQ99732 161 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 RTP3Q9BQQ7 232 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 KLHL4Q9C0H6 718 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 GPR88Q9GZN0 384 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 BICC1Q9H694 974 aaKnown RBP2.64□□□□□ -1.99
GYPB-207ENST00000506679 ANKZF1Q9H8Y5 726 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 ANKEF1Q9NU02 776 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 OLAHQ9NV23 265 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 PRMT7Q9NVM4 692 aaPredicted RBP2.64□□□□□ -1.99
GYPB-207ENST00000506679 PTTG2Q9NZH5 202 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 CPSF2Q9P2I0 782 aaKnown RBP2.64□□□□□ -1.99
GYPB-207ENST00000506679 IL17BQ9UHF5 180 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 TUBE1Q9UJT0 475 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 SLC7A7Q9UM01 511 aa2.64□□□□□ -1.99
GYPB-207ENST00000506679 hCG_1809904A0A1W2PP81 198 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 A0A1W2PPE2 198 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 A0A1W2PR64 198 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 A0A1W2PRB8 838 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 HYKKA2RU49 373 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 SYNDIG1LA6NDD5 238 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 DUXAA6NLW8 204 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 OR6C76A6NM76 312 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 GAPDHSO14556 408 aaPredicted RBP2.63□□□□□ -1.99
GYPB-207ENST00000506679 ABCB1P08183 1280 aaPredicted RBP2.63□□□□□ -1.99
GYPB-207ENST00000506679 LINGO3P0C6S8 592 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 GNB3P16520 340 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 ITGA3P26006 1051 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 MAT1AQ00266 395 aaKnown RBP2.63□□□□□ -1.99
GYPB-207ENST00000506679 PPIGQ13427 754 aaKnown RBP eCLIP2.63□□□□□ -1.99
GYPB-207ENST00000506679 SNTB1Q13884 538 aaKnown RBP2.63□□□□□ -1.99
GYPB-207ENST00000506679 SNAPC1Q16533 368 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 TMEM30BQ3MIR4 351 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 KIAA1644Q3SXP7 199 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 TMED8Q6PL24 325 aaPredicted RBP2.63□□□□□ -1.99
GYPB-207ENST00000506679 CORO6Q6QEF8 472 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 NOTCH2NLQ7Z3S9 236 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 ZNF554Q86TJ5 538 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 ISCA2Q86U28 154 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 FAM114A1Q8IWE2 563 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 CNBD1Q8NA66 436 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 AVL9Q8NBF6 648 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 TSPAN14Q8NG11 270 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 OR5M8Q8NGP6 311 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 OR1J1Q8NGS3 322 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 OR13J1Q8NGT2 312 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 FBXO17Q96EF6 278 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 FNBP1Q96RU3 617 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 SLF1Q9BQI6 1058 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 RHNO1Q9BSD3 238 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 FNDC11Q9BVV2 318 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 RBM4Q9BWF3 364 aaKnown RBP2.63□□□□□ -1.99
GYPB-207ENST00000506679 LAT2Q9GZY6 243 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 WNT5BQ9H1J7 359 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 VPS33BQ9H267 617 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 TBC1D17Q9HA65 648 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 Q9N2K0 584 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 SIX2Q9NPC8 291 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 SLC52A3Q9NQ40 469 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 LRWD1Q9UFC0 647 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 PPIEQ9UNP9 301 aaKnown RBP2.63□□□□□ -1.99
GYPB-207ENST00000506679 TRPV2Q9Y5S1 764 aa2.63□□□□□ -1.99
GYPB-207ENST00000506679 DISP3Q9P2K9 1392 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 IGLV9-49A0A0B4J1Y8 123 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 IGHV4-61A0A0C4DH41 118 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 A0A0G2JLW4 131 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 A0A1W2PPQ1 181 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 HMGB1P1B2RPK0 211 aaPredicted RBP2.62□□□□□ -1.99
GYPB-207ENST00000506679 TSPAN1O60635 241 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 PIGNO95427 931 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 CLPTM1O96005 669 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 IGHV4-59P01825 116 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 CD48P09326 243 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 EFNA1P20827 205 aaPredicted RBP2.62□□□□□ -1.99
GYPB-207ENST00000506679 DNASE1P24855 282 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 LMAN1P49257 510 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 CCR3P51677 355 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 P2RY6Q15077 328 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 TOMM20Q15388 145 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 MRGPRG-AS1Q2M3A8 158 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 ZNF876PQ49A33 203 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 KLHL26Q53HC5 615 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 DCAF10Q5QP82 559 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 CFAP58Q5T655 872 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 ERMARDQ5T6L9 678 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 GPR139Q6DWJ6 353 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 PRR27Q6MZM9 219 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 NAA16Q6N069 864 aaPredicted RBP2.62□□□□□ -1.99
GYPB-207ENST00000506679 PLPPR4Q7Z2D5 763 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 CAMKMTQ7Z624 323 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 MAML2Q8IZL2 1156 aaPredicted RBP2.62□□□□□ -1.99
GYPB-207ENST00000506679 ARHGAP24Q8N264 748 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 MAPKAPK5-AS1Q8N8E1 139 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 LSMEM1Q8N8F7 131 aa2.62□□□□□ -1.99
GYPB-207ENST00000506679 TC2NQ8N9U0 490 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms