RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 NAPRTQ6XQN6 538 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 DCUN1D3Q8IWE4 304 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 DENND6AQ8IWF6 608 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 CNTN4Q8IWV2 1026 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 OR5AR1Q8NGP9 310 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 SKA2Q8WVK7 121 aaPredicted RBP16.23■□□□□ 0.19
SNCA-209ENST00000506244 KCNE4Q8WWG9 221 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 JPH3Q8WXH2 748 aaPredicted RBP16.23■□□□□ 0.19
SNCA-209ENST00000506244 KCNJ9Q92806 393 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 FOPNLQ96NB1 174 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 DCBLD2Q96PD2 775 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 TAAR9Q96RI9 348 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 DDA1Q9BW61 102 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 ASPSCR1Q9BZE9 553 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 PHACTR1Q9C0D0 580 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 PPANQ9NQ55 473 aaKnown RBP16.23■□□□□ 0.19
SNCA-209ENST00000506244 FBXO6Q9NRD1 293 aaPredicted RBP16.23■□□□□ 0.19
SNCA-209ENST00000506244 IARS2Q9NSE4 1012 aaKnown RBP16.23■□□□□ 0.19
SNCA-209ENST00000506244 ACSL6Q9UKU0 697 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 CDYLQ9Y232 598 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 PCDHB11Q9Y5F2 797 aa16.23■□□□□ 0.19
SNCA-209ENST00000506244 A0A087WV48 116 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 E7ESA3 106 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 AGRPO00253 132 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 TAF4O00268 1085 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 TP73O15350 636 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 EIF3HO15372 352 aaKnown RBP eCLIP16.22■□□□□ 0.19
SNCA-209ENST00000506244 NIPSNAP2O75323 286 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 SLC5A2P31639 672 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 EIF2S3P41091 472 aaKnown RBP16.22■□□□□ 0.19
SNCA-209ENST00000506244 LEPRP48357 1165 aaKnown RBP16.22■□□□□ 0.19
SNCA-209ENST00000506244 MRPS25P82663 173 aaKnown RBP16.22■□□□□ 0.19
SNCA-209ENST00000506244 CTBP1Q13363 440 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 CACHD1Q5VU97 1274 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 TTC23LQ6PF05 361 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 UNC5AQ6ZN44 842 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 FAM92BQ6ZTR7 304 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 GALNT7Q86SF2 657 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 AMIGO1Q86WK6 493 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 KMT5CQ86Y97 462 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 ZBTB2Q8N680 514 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 C2CD4AQ8NCU7 369 aaPredicted RBP16.22■□□□□ 0.19
SNCA-209ENST00000506244 OR4E2Q8NGC2 313 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 ZPBPQ9BS86 351 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 SLC39A1Q9NY26 324 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 KLHL42Q9P2K6 505 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 PCDHGA3Q9Y5H0 932 aa16.22■□□□□ 0.19
SNCA-209ENST00000506244 ANKRD11Q6UB99 2663 aaPredicted RBP16.21■□□□□ 0.19
SNCA-209ENST00000506244 GSAPA4D1B5 854 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 C2orf74A8MZ97 194 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 PRAMEF10O60809 474 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 ERVK-10P10266 1014 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 CCL4P13236 92 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 CCNFP41002 786 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 ETV5P41161 510 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 ARL4DP49703 201 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 CBLBQ13191 982 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 PRKG2Q13237 762 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 DCAF12Q5T6F0 453 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 CEACAM20Q6UY09 585 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 IGDCC3Q8IVU1 814 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 ZBED8Q8IZ13 594 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 RAB42Q8N4Z0 105 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 PHC3Q8NDX5 983 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 FBXO36Q8NEA4 188 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 MAGEC3Q8TD91 643 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 USP7Q93009 1102 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 ART4Q93070 314 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 PWWP2AQ96N64 755 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 RAB11FIP5Q9BXF6 653 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 DPH1Q9BZG8 443 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 LATS2Q9NRM7 1088 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 OR6C2Q9NZP2 312 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 SEMA5BQ9P283 1151 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 POMT2Q9UKY4 750 aa16.21■□□□□ 0.19
SNCA-209ENST00000506244 CORO1CQ9ULV4 474 aaPredicted RBP16.21■□□□□ 0.19
SNCA-209ENST00000506244 TDRKHQ9Y2W6 561 aaKnown RBP16.21■□□□□ 0.19
SNCA-209ENST00000506244 CTAGE15A4D2H0 777 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 MAP3K7O43318 606 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 VPS26AO75436 327 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 CTAGE8P0CG41 777 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 FGF3P11487 239 aaPredicted RBP16.2■□□□□ 0.18
SNCA-209ENST00000506244 POLR2CP19387 275 aaPredicted RBP16.2■□□□□ 0.18
SNCA-209ENST00000506244 ABCG1P45844 678 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 SEPHS1P49903 392 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 MPP1Q00013 466 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 MC2RQ01718 297 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 ILF2Q12905 390 aaKnown RBP16.2■□□□□ 0.18
SNCA-209ENST00000506244 ZNF789Q5FWF6 425 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 HP1BP3Q5SSJ5 553 aaPredicted RBP16.2■□□□□ 0.18
SNCA-209ENST00000506244 BROXQ5VW32 411 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 LRRC8EQ6NSJ5 796 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 UGT3A1Q6NUS8 523 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 CTAGE6Q86UF2 777 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 ANKMY2Q8IV38 441 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 VRK3Q8IV63 474 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 CTAGE4Q8IX94 777 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 UNC5BQ8IZJ1 945 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 BMPERQ8N8U9 685 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 CFAP61Q8NHU2 1237 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms