RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 CASP4P49662 377 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 SRSF2Q01130 221 aaKnown RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 PMP22Q01453 160 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 ABRQ12979 859 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 OLIG2Q13516 323 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 EIF4EBP2Q13542 120 aaPredicted RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 SNTB1Q13884 538 aaKnown RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 GPR19Q15760 415 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 MAN2A1Q16706 1144 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 ALFQ53S48 1182 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 ZNF385CQ66K41 422 aaPredicted RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 LIPIQ6XZB0 460 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 ACAD11Q709F0 780 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 TRIM46Q7Z4K8 759 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 MAATS1Q7Z4T9 603 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 C11orf96Q7Z7L8 435 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 NLRP14Q86W24 1093 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 GALNT13Q8IUC8 556 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 CHERPQ8IWX8 916 aaKnown RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 SYCE1Q8N0S2 351 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 PELI3Q8N2H9 469 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 LIX1Q8N485 282 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 LZTR1Q8N653 840 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 GPATCH11Q8N954 259 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 SLC4A11Q8NBS3 891 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 OR7D4Q8NG98 312 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 ACTRT1Q8TDG2 376 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 ZNF473Q8WTR7 871 aaKnown RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 RSC1A1Q92681 617 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 MIEF2Q96C03 454 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 PERPQ96FX8 193 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 EPSTI1Q96J88 318 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 SEC16BQ96JE7 1060 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 GDAP1L1Q96MZ0 367 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 RUNDC3BQ96NL0 473 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 ZIM3Q96PE6 472 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 SIGLEC12Q96PQ1 595 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 CCT8L2Q96SF2 557 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 KCTD15Q96SI1 283 aaPredicted RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 NAP1L3Q99457 506 aaPredicted RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 CD180Q99467 661 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 CHP1Q99653 195 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 C7orf25Q9BPX7 421 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 TRIM51Q9BSJ1 452 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 BEX2Q9BXY8 128 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 NIF3L1Q9GZT8 377 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 NSRP1Q9H0G5 558 aaKnown RBP4.09□□□□□ -1.75
CPNE4-204ENST00000505331 CCDC134Q9H6E4 229 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 AGPAT3Q9NRZ7 376 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 NDOR1Q9UHB4 597 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 INTUQ9ULD6 942 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 NPIPA1Q9UND3 350 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 ATP8A1Q9Y2Q0 1164 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 ASB1Q9Y576 335 aa4.09□□□□□ -1.75
CPNE4-204ENST00000505331 EPPK1P58107 5090 aaKnown RBP4.09□□□□□ -1.76
CPNE4-204ENST00000505331 A0A0A6YYK5 440 aaPredicted RBP4.08□□□□□ -1.76
CPNE4-204ENST00000505331 AKR1B10O60218 316 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 MGRN1O60291 552 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 SNX2O60749 519 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 ALOX12BO75342 701 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 MTA2O94776 668 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 HEXIM1O94992 359 aaKnown RBP4.08□□□□□ -1.76
CPNE4-204ENST00000505331 ZBTB11O95625 1053 aaPredicted RBP4.08□□□□□ -1.76
CPNE4-204ENST00000505331 SERPING1P05155 500 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 EPXP11678 715 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 CREB1P16220 341 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 FDXRP22570 491 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 SOX5P35711 763 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 SOX11P35716 441 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 ETFBP38117 255 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 SKIV2L2P42285 1042 aaKnown RBP4.08□□□□□ -1.76
CPNE4-204ENST00000505331 PIK3CAP42336 1068 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 MTIF2P46199 727 aaKnown RBP4.08□□□□□ -1.76
CPNE4-204ENST00000505331 CYP2J2P51589 502 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 RAD23BP54727 409 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 SH3BGRP55822 239 aaPredicted RBP4.08□□□□□ -1.76
CPNE4-204ENST00000505331 STX17P56962 302 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 SNRPFP62306 86 aaKnown RBP4.08□□□□□ -1.76
CPNE4-204ENST00000505331 CHD3Q12873 2000 aaKnown RBP4.08□□□□□ -1.76
CPNE4-204ENST00000505331 RALGDSQ12967 914 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 PDCLQ13371 301 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 GRM3Q14832 879 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 ACOX1Q15067 660 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 ASTE1Q2TB18 679 aaPredicted RBP4.08□□□□□ -1.76
CPNE4-204ENST00000505331 SLC25A35Q3KQZ1 300 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 HSP90AA4PQ58FG1 418 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 TTMPQ5BVD1 217 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 CMPK2Q5EBM0 449 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 ATXN7L2Q5T6C5 722 aaPredicted RBP4.08□□□□□ -1.76
CPNE4-204ENST00000505331 SYPL2Q5VXT5 272 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 AFMIDQ63HM1 303 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 KAZNQ674X7 775 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 KLHL35Q6PF15 583 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 MYO7BQ6PIF6 2116 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 BRAT1Q6PJG6 821 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 DOK6Q6PKX4 331 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 CERS6Q6ZMG9 384 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 SIAH3Q8IW03 269 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 TRIM48Q8IWZ4 208 aa4.08□□□□□ -1.76
CPNE4-204ENST00000505331 RBM12BQ8IXT5 1001 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms