RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 UBE2E3Q969T4 207 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 ESAMQ96AP7 390 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 SNX27Q96L92 541 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 FNDC11Q9BVV2 318 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 S100A9P06702 114 aaKnown RBP16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 SLC35E2BP0CK96 405 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 EPORP19235 508 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 CYP3A5P20815 502 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 NOS3P29474 1203 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 PPP1R8Q12972 351 aaKnown RBP16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 CMTR2Q8IYT2 770 aaKnown RBP16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 EXOC2Q96KP1 924 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 GOLGA2P5Q9HBQ8 144 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 MRM3Q9HC36 420 aaKnown RBP16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 POLE4Q9NR33 117 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 PAK1IP1Q9NWT1 392 aaPredicted RBP16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 MAN2B2Q9Y2E5 1009 aa16.93■□□□□ 0.3
HMGXB3-201ENST00000502717 MAGEB17A8MXT2 336 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 C9IYK1 514 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 TLL1O43897 1013 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 OXSR1O95747 527 aaPredicted RBP16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 CKBP12277 381 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 SERPINA4P29622 427 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 MAPK8P45983 427 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 CDH12P55289 794 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 GALNT2Q10471 571 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 RASAL3Q86YV0 1011 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 ZNF557Q8N988 423 aaPredicted RBP16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 NCSTNQ92542 709 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 BTN2A3PQ96KV6 586 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 GFM1Q96RP9 751 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 ZNF607Q96SK3 696 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 SLITRK2Q9H156 845 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 MRPL17Q9NRX2 175 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 PFDN2Q9UHV9 154 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 ANKDD1BA6NHY2 528 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 CENPBD1B2RD01 187 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 ESR1P03372 595 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 COL21A1Q96P44 957 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 SLC2A6Q9UGQ3 507 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 ZNF214Q9UL59 606 aaPredicted RBP16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 PKD1L3Q7Z443 1732 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 CNTNAP1P78357 1384 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 TP73O15350 636 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 CPNE3O75131 537 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 MYCLP1P12525 358 aaPredicted RBP16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 ATP5C1P36542 298 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 SRSF11Q05519 484 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 IGFN1Q86VF2 1251 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 MFSD2AQ8NA29 543 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 PPTC7Q8NI37 304 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 LGALS12Q96DT0 336 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 PYURFQ96I23 114 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 TCF25Q9BQ70 676 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 XYLT2Q9H1B5 865 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 TBC1D14Q9P2M4 693 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 CHST10O43529 356 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 CCNB2O95067 398 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 DGKQP52824 942 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 PFKPQ01813 784 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 LAPTM5Q13571 262 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 DPY19L1Q2PZI1 675 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 IQCCQ4KMZ1 466 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 COQ5Q5HYK3 327 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 PAQR3Q6TCH7 311 aa16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 RPS27LQ71UM5 84 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 CHERPQ8IWX8 916 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-201ENST00000502717 GRID2O43424 1007 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 ECI2O75521 394 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 CREG1O75629 220 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 PGK1P00558 417 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 SMIM10L2AP0DMW4 78 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 SMIM10L2BP0DMW5 78 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 ATF4P18848 351 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 MAGEA6P43360 314 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 FAM171A1Q5VUB5 890 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 CPNE9Q8IYJ1 553 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 GPR156Q8NFN8 814 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 PCDHB3Q9Y5E6 796 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 LYVE1Q9Y5Y7 322 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 SLC25A14O95258 325 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 CCNDBP1O95273 360 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 IFNW1P05000 195 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 PRKACGP22612 351 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 CCL23P55773 120 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 CYP4F8P98187 520 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 PPIGQ13427 754 aaKnown RBP eCLIP16.91■□□□□ 0.33e-7■■■■□ 21
HMGXB3-201ENST00000502717 IFI44LQ53G44 452 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 USP45Q70EL2 814 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 EMID1Q96A84 441 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 B3GALT6Q96L58 329 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 POLE3Q9NRF9 147 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 SIX4Q9UIU6 781 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 SLC9A3R1O14745 358 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 GSTT2P0CG29 244 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 GSTT2BP0CG30 244 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 ATP12AP54707 1039 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 CD83Q01151 205 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 TECRLQ5HYJ1 363 aa16.91■□□□□ 0.3
HMGXB3-201ENST00000502717 GCNT6Q5T4J0 391 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms