RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CHST3Q7LGC8 479 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 SMIM29Q86T20 159 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 PI4KAP1Q8N8J0 262 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 ALG14Q96F25 216 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 SFXN2Q96NB2 322 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 SEPHS2Q99611 448 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 ST6GALNAC4Q9H4F1 302 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 TFB2MQ9H5Q4 396 aaKnown RBP4.47□□□□□ -1.69
VPS36-206ENST00000497149 ERVMER34-1Q9H9K5 563 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 OLFML3Q9NRN5 406 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 FAM118AQ9NWS6 357 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 WWOXQ9NZC7 414 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 PADI2Q9Y2J8 665 aa4.47□□□□□ -1.69
VPS36-206ENST00000497149 E9PI62 339 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 TRIM77I1YAP6 450 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 P2RY10O00398 339 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 FGF17O60258 216 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 DIAPH2O60879 1101 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 CELF2O95319 508 aaKnown RBP4.46□□□□□ -1.7
VPS36-206ENST00000497149 C22orf31O95567 290 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 WDPCPO95876 746 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 CCDC175P0C221 793 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 SLC6A6P31641 620 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 CAMK2DQ13557 499 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 RBBP5Q15291 538 aaKnown RBP4.46□□□□□ -1.7
VPS36-206ENST00000497149 PLD3Q8IV08 490 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 MAML2Q8IZL2 1156 aaPredicted RBP4.46□□□□□ -1.7
VPS36-206ENST00000497149 ARHGAP24Q8N264 748 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 Q8NFD4 153 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 NAA11Q9BSU3 229 aaPredicted RBP4.46□□□□□ -1.7
VPS36-206ENST00000497149 NUP85Q9BW27 656 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 ARRDC1-AS1Q9H2J1 176 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 B3GAT1Q9P2W7 334 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 SCN5AQ14524 2016 aa4.46□□□□□ -1.7
VPS36-206ENST00000497149 A0A1W2PPQ1 181 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 A0A1W2PRB8 838 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 FAM172BPA6NC97 362 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 OR6C76A6NM76 312 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 PTGESO14684 152 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 LMX1BO60663 402 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 IGLV2-11P01706 119 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 OR52Z1P0C646 297 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 FGF5P12034 268 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 PAX1P15863 534 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 ERCC2P18074 760 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 ACHEP22303 614 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 EPHA2P29317 976 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 DCTP40126 519 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 ZNF41P51814 821 aaPredicted RBP4.45□□□□□ -1.7
VPS36-206ENST00000497149 LIMK1P53667 647 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 RBPJQ06330 500 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 COG2Q14746 738 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 FAM133BQ5BKY9 247 aaKnown RBP4.45□□□□□ -1.7
VPS36-206ENST00000497149 KRBOX4Q5JUW0 171 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 PLA2G4FQ68DD2 849 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 CORO6Q6QEF8 472 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 C19orf48Q6RUI8 117 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 CCDC186Q7Z3E2 898 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 TMPRSS11BQ86T26 416 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 TRIML1Q8N9V2 468 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 LMNTD1Q8N9Z9 388 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 SLC4A11Q8NBS3 891 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 OR2T12Q8NG77 320 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 OR13J1Q8NGT2 312 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 FGFBP3Q8TAT2 258 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 MRPS27Q92552 414 aaKnown RBP4.45□□□□□ -1.7
VPS36-206ENST00000497149 MYADMQ96S97 322 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 RTP3Q9BQQ7 232 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 TRAF4Q9BUZ4 470 aaPredicted RBP4.45□□□□□ -1.7
VPS36-206ENST00000497149 MMP28Q9H239 520 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 ZCCHC17Q9NP64 241 aaKnown RBP4.45□□□□□ -1.7
VPS36-206ENST00000497149 MYNNQ9NPC7 610 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 SERINC1Q9NRX5 453 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 ZNF701Q9NV72 531 aaPredicted RBP4.45□□□□□ -1.7
VPS36-206ENST00000497149 LRWD1Q9UFC0 647 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 ABT1Q9ULW3 272 aaKnown RBP4.45□□□□□ -1.7
VPS36-206ENST00000497149 SLC7A7Q9UM01 511 aa4.45□□□□□ -1.7
VPS36-206ENST00000497149 IFITM10A6NMD0 228 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 GAPDHSO14556 408 aaPredicted RBP4.44□□□□□ -1.7
VPS36-206ENST00000497149 IGHV2-70P01814 119 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 NR3C1P04150 777 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 RAB40ALP0C0E4 278 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 MPZP25189 248 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 CX3CL1P78423 397 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 PRKCZQ05513 592 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 DMPKQ09013 629 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 PSMD6Q15008 389 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 TNIP1Q15025 636 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 TECRLQ5HYJ1 363 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 SLC27A1Q6PCB7 646 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 ZBTB49Q6ZSB9 765 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 DET1Q7L5Y6 550 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 SLFN11Q7Z7L1 901 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 ZNF554Q86TJ5 538 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 FOXP4Q8IVH2 680 aaPredicted RBP4.44□□□□□ -1.7
VPS36-206ENST00000497149 KLHDC9Q8NEP7 349 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 SSMEM1Q8WWF3 244 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 DHX58Q96C10 678 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 STAMBPL1Q96FJ0 436 aa4.44□□□□□ -1.7
VPS36-206ENST00000497149 LRRC3BQ96PB8 259 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms