RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 RSL1D1O76021 490 aaKnown RBP12.76□□□□□ -0.37
GARNL3-220ENST00000496711 KRT6AP02538 564 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 KRT6BP04259 564 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 FAM58BPP0C7Q3 252 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 MTHFD1P11586 935 aaKnown RBP12.76□□□□□ -0.37
GARNL3-220ENST00000496711 FCGR1AP12314 374 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 TCF3P15923 654 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 NFKBIAP25963 317 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 HTR1EP28566 365 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 BMPR1AP36894 532 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 GRIA2P42262 883 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 GNPDA1P46926 289 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 KRT6CP48668 564 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 HMGCS1Q01581 520 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 FXNQ16595 210 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 CYP51A1Q16850 503 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 LIN52Q52LA3 116 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 PRSS36Q5K4E3 855 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 CACHD1Q5VU97 1274 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 TMEM215Q68D42 235 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 FBXO46Q6PJ61 603 aaPredicted RBP12.76□□□□□ -0.37
GARNL3-220ENST00000496711 DLEU7Q6UYE1 221 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 FRS2Q8WU20 508 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 SKA2Q8WVK7 121 aaPredicted RBP12.76□□□□□ -0.37
GARNL3-220ENST00000496711 MRGPRX3Q96LB0 322 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 TSC22D3Q99576 134 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 ACTR8Q9H981 624 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 LRTM1Q9HBL6 345 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 LRRK1Q38SD2 2015 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 KANSL1LA0AUZ9 987 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 C7orf72A4D263 438 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 UPK3BL1B0FP48 263 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 UPK3BL2E5RIL1 263 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 KPNA5O15131 536 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 SLC16A5O15375 505 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 XYLBO75191 536 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 LEFTY1O75610 366 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 ARHGEF15O94989 841 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 HNRNPA1P09651 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
GARNL3-220ENST00000496711 HIST1H2AGP0C0S8 130 aaPredicted RBP12.76□□□□□ -0.37
GARNL3-220ENST00000496711 UMPSP11172 480 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 NCK1P16333 377 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 PSMC3P17980 439 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 EPORP19235 508 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 HIST1H2ADP20671 130 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 CYP2A7P20853 494 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 FASP25445 335 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 NNMTP40261 264 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 HNMTP50135 292 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 DGKQP52824 942 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 NTHL1P78549 312 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 MYBPC1Q00872 1141 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 PWP1Q13610 501 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 PTGR1Q14914 329 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 KIAA0040Q15053 153 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 GGTA1PQ4G0N0 100 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 INTS11Q5TA45 600 aaKnown RBP12.76□□□□□ -0.37
GARNL3-220ENST00000496711 ZBTB49Q6ZSB9 765 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 HSD11B1LQ7Z5J1 315 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 PROSER1Q86XN7 944 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 RGL4Q8IZJ4 473 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 PACRGLQ8N7B6 248 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 GLB1L3Q8NCI6 653 aaPredicted RBP12.76□□□□□ -0.37
GARNL3-220ENST00000496711 CYB5D2Q8WUJ1 264 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 SLC13A3Q8WWT9 602 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 MYLIPQ8WY64 445 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 HIST1H2AHQ96KK5 128 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 RAD9AQ99638 391 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 CGREF1Q99674 301 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 SLC29A1Q99808 456 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 HIST1H2AJQ99878 128 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 H2AFJQ9BTM1 129 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 FAM83DQ9H4H8 585 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 ZNF696Q9H7X3 374 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 RAD18Q9NS91 495 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 NFKBIL1Q9UBC1 381 aaPredicted RBP12.76□□□□□ -0.37
GARNL3-220ENST00000496711 MBD1Q9UIS9 605 aaPredicted RBP12.76□□□□□ -0.37
GARNL3-220ENST00000496711 MAGEL2Q9UJ55 1249 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 PCDHGB4Q9UN71 923 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 SLC8A2Q9UPR5 921 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 PCDHGB5Q9Y5G0 923 aa12.76□□□□□ -0.37
GARNL3-220ENST00000496711 TTC34A8MYJ7 566 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 SEC22BO75396 215 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 AP2A2O94973 939 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 KCNH1O95259 989 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 EPCAMP16422 314 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 SLC6A12P48065 614 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 TXNL4AP83876 142 aaKnown RBP12.75□□□□□ -0.37
GARNL3-220ENST00000496711 PRKCQQ04759 706 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 GK3PQ14409 553 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 SGO1Q5FBB7 561 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 PPP4R4Q6NUP7 873 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 SERPINA13PQ6UXR4 307 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 NEK10Q6ZWH5 1172 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 VRK3Q8IV63 474 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 LIX1Q8N485 282 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 TRAM1L1Q8N609 369 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 NAT16Q8N8M0 369 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 OR8J3Q8NGG0 315 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 SPPL3Q8TCT6 385 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms