RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 KRT84Q9NSB2 600 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 CISHQ9NSE2 258 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 ABCB8Q9NUT2 735 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 PLA2G3Q9NZ20 509 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 GIMAP2Q9UG22 337 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 GGA2Q9UJY4 613 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 VPS28Q9UK41 221 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 TSPAN16Q9UKR8 245 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 INTS6Q9UL03 887 aaKnown RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 OAZ3Q9UMX2 235 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 HBS1LQ9Y450 684 aaKnown RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 PCDHGA1Q9Y5H4 931 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 ARID1BQ8NFD5 2236 aaPredicted RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 MED13Q9UHV7 2174 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 A0A1B0GTQ1 180 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 WIPF3A6NGB9 483 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 SAC3D1A6NKF1 404 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 ZAR1LA6NP61 321 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 AGAP14A8MT82 685 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 TOR1BO14657 336 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 VILLO15195 856 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 CTIFO43310 598 aaKnown RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 LATO43561 262 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 SYNCRIPO60506 623 aaKnown RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 PGM3O95394 542 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 SCGB1D1O95968 90 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 MT-CO3P00414 261 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 IGLV3-25P01717 112 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 DNTTP04053 509 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 CLEC3BP05452 202 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 FYNP06241 537 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 DLDP09622 509 aaKnown RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 RALAP11233 206 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 PORP16435 677 aaPredicted RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 ALOX12P18054 663 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 PI3P19957 117 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 CD27P26842 260 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 OXTRP30559 389 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 GTF2H1P32780 548 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 DRD3P35462 400 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 UQCRFS1P47985 274 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 ME1P48163 572 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 TKTL1P51854 596 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 NDUFA8P51970 172 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 PRKAG1P54619 331 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 UCNP55089 124 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 DAOAP59103 153 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 CYP4F2P78329 520 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 COG7P83436 770 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 ZBTB16Q05516 673 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 ZNF844Q08AG5 666 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 BST2Q10589 180 aaKnown RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 CUL2Q13617 745 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 CCNIQ14094 377 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 CSHL1Q14406 222 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 GPR68Q15743 365 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 EDRF1Q3B7T1 1238 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 MPP7Q5T2T1 576 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 CERCAMQ5T4B2 595 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 FAM90A2PQ658T7 463 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 ZNF776Q68DI1 518 aaPredicted RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 KIAA0895LQ68EN5 471 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 RFWD3Q6PCD5 774 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 NCEH1Q6PIU2 408 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 CHST9Q7L1S5 443 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 PXKQ7Z7A4 578 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 TAC4Q86UU9 113 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 CEP57L1Q8IYX8 460 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 ARHGAP18Q8N392 663 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 GUF1Q8N442 669 aaKnown RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 TP53I13Q8NBR0 393 aaPredicted RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 CLEC4CQ8WTT0 213 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 ST8SIA2Q92186 375 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 TFAP2BQ92481 460 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 LCORQ96JN0 433 aaPredicted RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 CNDP2Q96KP4 475 aaKnown RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 ZNF578Q96N58 590 aaPredicted RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 ZNF396Q96N95 335 aaPredicted RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 NUP58Q9BVL2 599 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 DCLK3Q9C098 648 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 MMRN2Q9H8L6 949 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 KCNK9Q9NPC2 374 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 NFKBIL1Q9UBC1 381 aaPredicted RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 HECAQ9UBI9 543 aaPredicted RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 XPO7Q9UIA9 1087 aaKnown RBP4.29□□□□□ -1.72
VPS52-222ENST00000495981 FZD4Q9ULV1 537 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 NFU1Q9UMS0 254 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 USP22Q9UPT9 525 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 ZNF510Q9Y2H8 683 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 FRMD4BQ9Y2L6 1034 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 COQ4Q9Y3A0 265 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 PSAT1Q9Y617 370 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 STAB1Q9NY15 2570 aa4.29□□□□□ -1.72
VPS52-222ENST00000495981 A0A1B0GVL5 298 aa4.28□□□□□ -1.72
VPS52-222ENST00000495981 FAM90A7PA6NKC0 464 aa4.28□□□□□ -1.72
VPS52-222ENST00000495981 FAM90A22PA8MWA6 464 aa4.28□□□□□ -1.72
VPS52-222ENST00000495981 FAM90A12PA8MX19 464 aa4.28□□□□□ -1.72
VPS52-222ENST00000495981 FAM90A23PA8MXZ1 464 aa4.28□□□□□ -1.72
VPS52-222ENST00000495981 E7ENX8 843 aa4.28□□□□□ -1.72
VPS52-222ENST00000495981 MID1O15344 667 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms