RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 LAT2Q9GZY6 243 aa3.83□□□□□ -1.8
ITGB1-216ENST00000493758 CCDC68Q9H2F9 335 aa3.83□□□□□ -1.8
ITGB1-216ENST00000493758 SPHK1Q9NYA1 384 aa3.83□□□□□ -1.8
ITGB1-216ENST00000493758 TMEM5Q9Y2B1 443 aa3.83□□□□□ -1.8
ITGB1-216ENST00000493758 KCNK7Q9Y2U2 307 aa3.83□□□□□ -1.8
ITGB1-216ENST00000493758 PASKQ96RG2 1323 aa3.83□□□□□ -1.8
ITGB1-216ENST00000493758 STK36Q9NRP7 1315 aa3.83□□□□□ -1.8
ITGB1-216ENST00000493758 LOC101059948A0A1B0GTJ6 334 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 hCG_1807616A0A1W2PRN6 198 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 FEZF1A0PJY2 475 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 MEIOCA2RUB1 952 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 TMEM221A6NGB7 291 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 TSPAN1O60635 241 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 KHDRBS3O75525 346 aaKnown RBP3.82□□□□□ -1.8
ITGB1-216ENST00000493758 GJB3O75712 270 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 ZFAND5O76080 213 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 CA4P22748 312 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 CA6P23280 308 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 CEACAM8P31997 349 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-216ENST00000493758 STAT2P52630 851 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 C14orf177Q52M58 125 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 PDLIM3Q53GG5 364 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-216ENST00000493758 CORO6Q6QEF8 472 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 FIGLAQ6QHK4 219 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 C17orf53Q8N3J3 647 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-216ENST00000493758 ZNF383Q8NA42 475 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 ZNF248Q8NDW4 579 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 OR2AJ1Q8NGZ0 328 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 OLIG1Q8TAK6 271 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 LPGAT1Q92604 370 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 DYRK2Q92630 601 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 RSRC1Q96IZ7 334 aaKnown RBP3.82□□□□□ -1.8
ITGB1-216ENST00000493758 OPRPNQ99935 248 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-216ENST00000493758 SDF4Q9BRK5 362 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 FGF22Q9HCT0 170 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 OSER1Q9NX31 292 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 BARHL2Q9NY43 387 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 PTTG2Q9NZH5 202 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 ADD3Q9UEY8 706 aaKnown RBP3.82□□□□□ -1.8
ITGB1-216ENST00000493758 MTUS1Q9ULD2 1270 aa3.82□□□□□ -1.8
ITGB1-216ENST00000493758 PTRH2Q9Y3E5 179 aaKnown RBP3.82□□□□□ -1.8
ITGB1-216ENST00000493758 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.82□□□□□ -1.8
ITGB1-216ENST00000493758 RSF1Q96T23 1441 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-216ENST00000493758 A0A087WW49 117 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 ANKUB1A6NFN9 424 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 DNM1LO00429 736 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 TOMM70O94826 608 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 OR2T7P0C7T2 308 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 DANCRP0C864 163 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 CEBPBP17676 345 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 SAT1P21673 171 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 LUMP51884 338 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-216ENST00000493758 PDX1P52945 283 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 KCNJ10P78508 379 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 STK4Q13043 487 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 GTDC1Q4AE62 458 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 ADAMTSL4-AS1Q5T5F5 129 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-216ENST00000493758 FAAP20Q6NZ36 180 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 FBXL22Q6P050 247 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 TEX38Q6PEX7 206 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 PSRC1Q6PGN9 363 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-216ENST00000493758 LINC00346Q8IVM7 164 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 ZNF843Q8N446 348 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 MAPK1IP1LQ8NDC0 245 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 EXD1Q8NHP7 514 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 FGFBP3Q8TAT2 258 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 HCAR2Q8TDS4 363 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 CCDC107Q8WV48 283 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 CALML4Q96GE6 196 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 FNBP1Q96RU3 617 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 WDR13Q9H1Z4 485 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.81□□□□□ -1.8
ITGB1-216ENST00000493758 ZDHHC18Q9NUE0 388 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 CRNNQ9UBG3 495 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-216ENST00000493758 IL17BQ9UHF5 180 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 SNX8Q9Y5X2 465 aa3.81□□□□□ -1.8
ITGB1-216ENST00000493758 IGHV4-4A0A075B6R2 117 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 HYKKA2RU49 373 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 KLF11O14901 512 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 XRCC3O43542 346 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 GJA1P17302 382 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 MAP2K2P36507 400 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 EIF2DP41214 584 aaKnown RBP3.8□□□□□ -1.8
ITGB1-216ENST00000493758 SNX16P57768 344 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 B3GALT5-AS1P59052 145 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 PPARDQ03181 441 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 ZFP69Q49AA0 526 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 RILPL1Q5EBL4 403 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 DCAF10Q5QP82 559 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 ZNF790Q6PG37 636 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 TMPRSS11FQ6ZWK6 438 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 NUDT13Q86X67 352 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 TAGAPQ8N103 731 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 LSMEM2Q8N112 164 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 MAPKAPK5-AS1Q8N8E1 139 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 MCUQ8NE86 351 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 OR13J1Q8NGT2 312 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 OR2T11Q8NH01 316 aa3.8□□□□□ -1.8
ITGB1-216ENST00000493758 DHX58Q96C10 678 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms