RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CAPN2P17655 700 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 HIST1H2ADP20671 130 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 GALCP54803 685 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 IKQ13123 557 aaPredicted RBP3.59□□□□□ -1.83
SMC4-223ENST00000493695 WTAPQ15007 396 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 E2F5Q15329 346 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 PNLIPRP3Q17RR3 467 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 HIST3H2AQ7L7L0 130 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 LRRTM1Q86UE6 522 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 MCEMP1Q8IX19 187 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 LINC00612Q8N6U2 182 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 ZNF383Q8NA42 475 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 SLC38A9Q8NBW4 561 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 NSL1Q96IY1 281 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 DACH2Q96NX9 599 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 FOXN4Q96NZ1 517 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 NCAPGQ9BPX3 1015 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 LAT2Q9GZY6 243 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 PIGMQ9H3S5 423 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 PLK3Q9H4B4 646 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 EPB41L5Q9HCM4 733 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 ADD3Q9UEY8 706 aaKnown RBP3.59□□□□□ -1.83
SMC4-223ENST00000493695 MAN1B1Q9UKM7 699 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 NENFQ9UMX5 172 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 CMAHPQ9Y471 501 aa3.59□□□□□ -1.83
SMC4-223ENST00000493695 PRRC2AP48634 2157 aaKnown RBP3.59□□□□□ -1.84
SMC4-223ENST00000493695 IGLV3-10A0A075B6K4 115 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 A0A1W2PQ09 198 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 OR2A25A4D2G3 310 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 H3BQ06 376 aaPredicted RBP3.58□□□□□ -1.84
SMC4-223ENST00000493695 OGG1O15527 345 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 AHCYL1O43865 530 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 NR2F1P10589 423 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 SELLP14151 372 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 NKX2-1P43699 371 aaPredicted RBP3.58□□□□□ -1.84
SMC4-223ENST00000493695 MMP15P51511 669 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 GPR143P51810 404 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 CTSCP53634 463 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 CDR2Q01850 454 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 LRMPQ12912 555 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 RAB6CQ53S08 254 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 CYP4A22Q5TCH4 519 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 NSUN5P2Q63ZY6 315 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 SDCCAG8Q86SQ7 713 aaPredicted RBP3.58□□□□□ -1.84
SMC4-223ENST00000493695 CCDC190Q86UF4 302 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 PLD3Q8IV08 490 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 SUSD6Q92537 303 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 SRSF8Q9BRL6 282 aaKnown RBP3.58□□□□□ -1.84
SMC4-223ENST00000493695 LRRC61Q9BV99 259 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 CLEC7AQ9BXN2 247 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 FTOQ9C0B1 505 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMC4-223ENST00000493695 TMEM39BQ9GZU3 492 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 RAB6CQ9H0N0 254 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 UPF3AQ9H1J1 476 aaKnown RBP3.58□□□□□ -1.84
SMC4-223ENST00000493695 SEMA6AQ9H2E6 1030 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 SMARCAD1Q9H4L7 1026 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 PRO0461Q9UI25 63 aa3.58□□□□□ -1.84
SMC4-223ENST00000493695 ZNF646O15015 1829 aaPredicted RBP3.57□□□□□ -1.84
SMC4-223ENST00000493695 MITFO75030 526 aaPredicted RBP3.57□□□□□ -1.84
SMC4-223ENST00000493695 TPPPO94811 219 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 AP2A2O94973 939 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 CLTBP09497 229 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 PNLIPRP2P54317 469 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 CXCL9Q07325 125 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 COX10Q12887 443 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 CHAF1BQ13112 559 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 PCLAFQ15004 111 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 ZSCAN23Q3MJ62 389 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 TAF1BQ53T94 588 aaPredicted RBP3.57□□□□□ -1.84
SMC4-223ENST00000493695 RILPL1Q5EBL4 403 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 FAM109BQ6ICB4 259 aaPredicted RBP3.57□□□□□ -1.84
SMC4-223ENST00000493695 ADGRA1Q86SQ6 560 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 ADIPOR2Q86V24 386 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 ZNF584Q8IVC4 421 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 RASGEF1CQ8N431 466 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 OR8K5Q8NH50 307 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 SLC47A1Q96FL8 570 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 CEP295NLQ96MC4 621 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 GFI1Q99684 422 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 PAG1Q9NWQ8 432 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 B3GALT5Q9Y2C3 310 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 SNX8Q9Y5X2 465 aa3.57□□□□□ -1.84
SMC4-223ENST00000493695 ABCA7Q8IZY2 2146 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 ZNF541Q9H0D2 1346 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 TMEM8BA6NDV4 472 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 DNM1LO00429 736 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 ENTPD3O75355 529 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 ACTN2P35609 894 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 RPS18P62269 152 aaKnown RBP3.56□□□□□ -1.84
SMC4-223ENST00000493695 STK4Q13043 487 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 MFAP5Q13361 173 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 MVPQ14764 893 aaKnown RBP3.56□□□□□ -1.84
SMC4-223ENST00000493695 C2CD6Q53TS8 623 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 SLC25A30Q5SVS4 291 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 ZDHHC20Q5W0Z9 365 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 KRT79Q5XKE5 535 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 TMEM198Q66K66 360 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 TEX11Q8IYF3 940 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 POC5Q8NA72 575 aa3.56□□□□□ -1.84
SMC4-223ENST00000493695 C1orf131Q8NDD1 294 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms